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Mutant Lines
53-3122-1

53-3122-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 5; Position: 24723753 [Map]; Strand: c
- AT5G61470.1 - [+] show detail - C2H2-like zinc finger protein
  Distance: 0; Region: exon1 (CDS)

CCTTCATAGA TTCTATGGTC ACTTGGTGGA AATCGACAAG TTACTTGGCT 
GGAGCTAGGA ACATATAGTG AATCTTTTTG TGACCACCAA GTGCTTGACC 
AGATGCAAAC ATTCTGTTAC AAATTTGACA CTCGTATTGT CGTCGAACTA 
TTGGCCCATC TTCCCCGAAA TGATTCTTGT TGGAAATCTT CAATCGCTTG 
TATTTGTGGC TCGTTCGATG ACCACCTAAT GCCTGATACG AACGTAAAAC 
TTTTCCACAA GTATCACACG TATATTTACT TTGTTTCTTA CCCCTTTTCC 
TTTTTCCACC GTAATATGCG TTTTCATCAC CATAATCGTC ATCATCTTCA 
TC

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 24753980 [Map]; Strand: c
  - AT5G61560.2 - [+] show detail - U-box domain-containing protein kinase family protein
    Distance: 0; Region: exon5 (CDS)
  - AT5G61560.1 - [+] show detail - U-box domain-containing protein kinase family protein
    Distance: 0; Region: exon5 (CDS)
Flanking Genome Sequence: 53-3122-1 - 3-prime edge
```
ATATAGCTGA TGCAATCTCT AAAGCAGTTC AAGATCATGG AATTAGTGAG 
CTAGTCATTG GAGCTTCCTC TTCAATCATC TTCTCATGGT AACATTTAAA 
ACACAATCTC TTAGCTTTAG ATTTCCATCA GATTGTTTAA TCTTTTTCCT 
TTTGTAGGAA GTTGAAGAGA AGCAACTTGT CTTCAAGAAT TGCAGATGCT 
ACACCAAGAT TTTGCTCAGT TCATCTCACC TCGACG
```

AT5G61470.1

Model type: Protein coding
Short Description: C2H2-like zinc finger protein
Computational Description: C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT3G60580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G61560.1

Model type: Protein coding
Short Description: U-box domain-containing protein kinase family protein
Computational Description: U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT4G25160.1); Has 112471 Blast hits to 110615 proteins in 4538 species: Archae - 130; Bacteria - 13122; Metazoa - 41054; Fungi - 8748; Plants - 32669; Viruses - 288; Other Eukaryotes - 16460 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G61560.2

Model type: Protein coding
Short Description: U-box domain-containing protein kinase family protein
Computational Description: U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT4G25160.1).
Link: InterPro Scan - TAIR