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53-3163-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22428640 [Map]; Strand: c
      • AT1G60913.1 - [+] show detail - Rapid alkalinization factor (RALF) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3163-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA CTACACATGT GNTATCGGGA AAAGNNTCAT 
    ATGGNNTNAT GTANATCACA TNTACAAATC ATTTTCTACT AAATATGAAA 
    AAAAATTTAT CACTAATCTA CATTATTGAT GTGATATGGA ACNTTGTTAC 
    ATTATCAAAT TTTAATTATT TTAAAATTCT TTCATTTTTT TTAACTTCAA 
    ATTATTGTTA TATATATTTT AATAAATTAT AAATTAATGT GTTATCAGGC 
    ATAACTTCAA GTTCGTGTAA CATGAGATGT GTCTTGTGAA AGCATGACAT 
    GTAACTTTCG TTGTAAAATA AAATAAAAAA CAAATGAGCT CAGATATGAG 
    GCTATATCAT CCGATTAATC GGAGAATTGC TAAGGACCCA ACCTTAGCTT 
    AAAGCAAATT TCATCAACGC TCAAATGCAC CAGCGGGGAA TTGAACCCGG 
    GTCTGTACCG TGGCAGGGTA CTATTCTACC ACTAGACCAG TGGTGCTACT 
    TGCCTACTAT CTTACTTTTC TAATATAAAT CCAGTATTTC ACGTTTAGTG 
    AGAGCAATTG CACATGTTCC AGCATTGCAT TTAGAAACTG ATGTGGGTTG 
    GTCTTTTAGT TTTTAAAAGA ACAATAATAT AAACTGATGT GGGTTGGTTA 
    GTGTTCAATG AAAACCAAAG CTACTATTAC CAACACACAC CTTAATTGAT 
    TGTGCCTGGA CAAGTACTAT TGCAGTCA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22428693 [Map]; Strand: c
      • AT1G60913.1 - [+] show detail - Rapid alkalinization factor (RALF) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3163-1 - 3-prime edge 
    CTTTTGACAA CCAGGAGGAA GATGGTACTG GTTGACTGGA ACTCTGACAC 
    AATTTTTGGG ATCTTGAGTG CAGTCTGGAA CTCTATCTTT TGCAATAGCT 
    CTATATTTTA TGTATCTTCC TTCTCCGAAT CCGCTGAACA ATGATAATAC 
    AATCACTATT GACACAAAGA AAAGACTAGT AAGACTCATT TTGTGTGCAG 
    CCATTGTTTA GAAACCGAAA AATGATGTAT TTAATCTTCT TGGTCTTTTT 
    CTTTGTTGTT GTATTTTGCA GTTTGAGTTG GTGATTATTG G

AT1G60913.1

Model type
Protein coding
Short Description
Rapid alkalinization factor (RALF) family protein
Curator Summary
Encodes a Rapid ALkalinization Factor (RALF) family protein
Computational Description
Rapid alkalinization factor (RALF) family protein; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801); BEST Arabidopsis thaliana protein match is: RALF-like 7 (TAIR:AT1G60815.1); Has 11 Blast hits to 11 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR