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Mutant Lines
53-3185-1

53-3185-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 24150015 [Map]; Strand: c
  - AT5G59980.2 - [+] show detail - Polymerase/histidinol phosphatase-like
    Distance: 232; Region: intergenic
  - AT5G59990.1 - [+] show detail - CCT motif family protein
    Distance: 968; Region: intergenic
Flanking Genome Sequence: 53-3185-1 - 5-prime edge
```
TCTTTAGCTA TGGCTATGGA GGGAGATGTA GGCCCTCCGG CGACATTGTC 
CCTGACTTTT GTCGGCCGGC GGTAGATTTA CCGACTCTCC ACTCTTAAAT 
ATTTTCAACN TTTTTTTTTN TTTTTAAAAA TTTAANCNAA AANCCTTTTT 
TTNNACCCCA ANTCCCCAA
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 24150139 [Map]; Strand: c
- AT5G59980.2 - [+] show detail - Polymerase/histidinol phosphatase-like
  Distance: 356; Region: intergenic
- AT5G59990.1 - [+] show detail - CCT motif family protein
  Distance: 844; Region: intergenic

AGAAAGACTG CTCTCTTTCC TTTTCAAAAC TACTTTAATT ATAATCTAAT 
TGAGAAGCAT TATTCTTCAC ATTATTACTA ATTACCTAAT TGTGAGAAAA 
TTTATTCTCT TATTATTACT AATGATGCCT AACATTCAAA TTATTTTCAC 
NTTTTAAATA AAAATTAATT ATTTTGTTAC TGTTGGAAAA TAATATAGTC 
TTACAATAAA AGAAATATTT TTTTCTTGCA AAATATCAAA AGTGCTTGAG 
AAACTTTTCC ATGGCTTTTT TTTTTGGG

AT5G59980.2

Model type: Protein coding
Short Description: Polymerase/histidinol phosphatase-like
Computational Description: Polymerase/histidinol phosphatase-like; FUNCTIONS IN: tRNA-intron endonuclease activity, ribonuclease activity, catalytic activity; INVOLVED IN: tRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: trichome; CONTAINS InterPro DOMAIN/s: Polymerase/histidinol phosphatase-like (InterPro:IPR016195), RNase P subunit p30 (InterPro:IPR002738); Has 1908 Blast hits to 1535 proteins in 339 species: Archae - 16; Bacteria - 381; Metazoa - 491; Fungi - 307; Plants - 100; Viruses - 13; Other Eukaryotes - 600 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G59990.1

Model type: Protein coding
Short Description: CCT motif family protein
Computational Description: CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT5G41380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR