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53-3246-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 288373 [Map]; Strand: c
      • AT3G01810.3 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: -165; Region: promoter
      • AT3G01810.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: -196; Region: promoter
      • AT3G01810.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: -200; Region: promoter
    Flanking Genome Sequence: 53-3246-1 - 5-prime edge 
    GAAACGGCGA CATTACGGTG ATCTCCTGGT CCCTGACTAA AAAAGTGAAC 
    ACCGACGGGC TTTAATGGTC ACAAATTTCG ATAGATTTTG CCTTAGTCTC 
    CGTCACCAAT GCGAGTGGGC AAAGATTAAA TGATATCGTT ATTACGTCTT 
    TAATATTGTT ATTGCTCAAC ATTTAGATAT ATCATATATG TACATGTACA 
    TGTACATGCT TTTTTTTTGG TAATATCTTT TGGCCNNCAA ATNNTNCAGC 
    TGGTNNTNTN CTNATNTNNC CTACNTTTTT TTNTTAGGGA TNAATTTNAA 
    ATNTNAAANG CNTTNANTTT TNAAATNTAA AATTNGGGGT NGGGNAGGAC 
    GGTTTNNTTT TNANTTTTGT NGCAAAAANG GNCCNANTTN AAAGTAANCT 
    NTGTNNNAAA NCTTTNTANT NNGTTNNAAA NCNCNCTNTN ANTTNGNAAN 
    GCTNAAATAA GCTACNAGCC CGGNCNGTNA ACCACGGGNC CCTTTTAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 288456 [Map]; Strand: c
      • AT3G01810.3 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: -82; Region: promoter
      • AT3G01810.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: -113; Region: promoter
      • AT3G01810.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: -117; Region: promoter
    Flanking Genome Sequence: 53-3246-1 - 3-prime edge 
    GCCGTTTCGA TATTTGCACG ATCAAACTCC TTTTTTTATT CTTTTTTGGT 
    CATTTTCAGA TTTTTCCAAA TTGAAATTCT TCTCTCTTTT TTTTGCTTTC 
    TTTTCTTTAT GGCATCATAA ATTTTTTTTA AGTCGTAATC TAGAGGAGAC 
    TAAAGATTCT TCATTCTGTG TCAGNGGCTC ACATCCTCTG ATTAACCAAA 
    ACGCACACAA ACAAAGAAGA AAAAAAGCTA TGAAAACAGG AAAAAAAATC 
    GGAAATATCA GTCTTGTCTA AANCGACGAA GAAGAAGAGG AAGAATCGAG 
    ACAAACATTT CACATTCC

AT3G01810.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 1327 Blast hits to 470 proteins in 132 species: Archae - 2; Bacteria - 131; Metazoa - 139; Fungi - 114; Plants - 114; Viruses - 0; Other Eukaryotes - 827 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G01810.2

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 1232 Blast hits to 443 proteins in 120 species: Archae - 2; Bacteria - 119; Metazoa - 136; Fungi - 117; Plants - 114; Viruses - 0; Other Eukaryotes - 744 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G01810.3

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2).
Link
InterPro Scan - TAIR