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53-3288-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25514597 [Map]; Strand: c
      • AT5G63750.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-3288-1 - 5-prime edge 
    GATAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
    CATCCTACTT TCATCCTCAT GTTTCTCCGA TGGGACTCTC ATGAAGTTTC 
    TGAGTTTTTG GTTGAAAACA ACGAAAAAGT CTTGTCGGAA TCAGGTTTGA 
    AACCAGTGGT AGTTGATCCG AATCAAGACT TATATAAGAT TTCTTCTTGT 
    GGGATTTGCT TTAAGACTTG TGATGATGGT GATTACTTAA TCTCCACGCC 
    CTTTTGCTCT CACATGTTCT GCAAATCTTG TTGGAGAAAG TATCTTGAAA 
    AGAATTTCTA CTTGGTGGAG AAAACCCAAA CTCGAATCTC TTGTCCTCAT 
    GGAGCTTGTC AAGCCGCGGT TGGACCGGAC ACGATTCAGA AGCTAACCGT 
    ATGTGATCAA GAGATGTACG TGGAGTATAT TCTGAGATCT TACATTGAGG 
    GAAACAAGGT ATTGGAGATC AAATACTGTC CTGCACAGGA TTGCAATTAC 
    GTCATTGAGT TTCATCAGAA GAATCATGAT GGTGCTGATC AGGAAGACTA 
    TGGCTTCAAC GTGGTGTGTC TCTGTGGTCA TATCTTCTGC TGGAGATGCA 
    TGCTTGAGTC ACACAAACCA GTGACCTGCA ACAACGCGTC TGATTGGTTG 
    TTTCGAGACC TAAATAGCTT ATCGAAGGAA TCAGGTGAAA AGCCATTGAG 
    CCTCTCCTCG TTCGAAACCA GAGAAAAGAC TTACCCTCTC TCCTCGATCA 
    AAGCCACCAA GAAAGTTTGC CCTC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25514660 [Map]; Strand: c
      • AT5G63750.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-3288-1 - 3-prime edge 
    ACGGTCGCAT CGGGTTTTGA TAACGAGAAG ATCTCAGAGA TTTCGGCGAT 
    CTGCTTCTTC ATCTTTCCTT TAAGTTGATC TCTCGTTAGA ACAGAGTATG 
    GTCCCTCTCG ATTGTTCTCC ATTGTGTGCC TAAGATTGAC AAAAATCAGA 
    AAAACAAATC AATGAATCAT AACAAAGAGA TTGATCGATG GATACACNTT 
    ATAAGGAATA GGGTTAAGGC TTACAGGTAG CTTGCGCCTC AATCAACAAA 
    AAGAATCGAA GGCGAGAGTT ATCGTTCTTA GTTTTCTCTT AATCGTCTCT 
    AGATGATTTC TGTTTCAACT TTTTAGGGTT TTACCTTTTC TCACTCGCTT 
    ATGGGA

AT5G63750.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
ARIADNE 13 (ARI13); FUNCTIONS IN: zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: IBR domain-containing protein (TAIR:AT5G63730.1); Has 1670 Blast hits to 1662 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 716; Fungi - 141; Plants - 537; Viruses - 0; Other Eukaryotes - 276 (source: NCBI BLink).
Link
InterPro Scan - TAIR