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Mutant Lines
53-3326-1

53-3326-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 10598924 [Map]; Strand: w
- AT3G28345.1 - [+] show detail - ABC transporter family protein
  Distance: -149; Region: promoter

CTCTCTCTCT CTCTCTTTTT CTCTAAGAGG AAACTTTTTT TTTNGCTTTT 
TTNTTTTNGG GGATCCCTTN GTTAATTTNA TGNGANGTTT TNGTNGAANG 
CTTCATTCAC ATCTCGTCNA TNAAANGNGG NACCCGGCTG CTNTTTATAN 
ATNGGGNGAN ANANAGAGGG ANAGGACATA TATCGATTTT TTTTGGGTNN 
NANANANAAT CCCCATNTNT NANCCCCCTN AANCTATNAA TANNAAGNCT 
GGGATTTTTT AAAGNAATAT NTTTAAANAA ACTNTACCCC CATNAAACGT 
TATNTTTTTN GNCNCCACTT TACTTNGNCT NAGGCNTCNC CAANAAAAAT 
TCCNATATTT NCTTCTATTA ANAAAAGNAN CTNTNTTTNA NAGGTNTCGN 
CCTTNAATAG NNAAAAANAA AGTTTTCTCA ANTTTAGANA AAAATANANA 
TTTTNNCTTT TGGNCTNTAN AAANANANAT TTCNACAATC NATCTNTNTT 
TTTCCCTTNA GTTTNGNGNA ANCTNTTTTT NAANGGGGNC CNTTANAGNN 
CAANCCCTTN AAAANAAAAA AAANTNTNGN GGNGAAAATT AAAAAGGGCC 
CAAAAATAGC ATGTNTTCAA AATTTTTTAT TANTTAGGAA GTTTCAAATG 
GTTTGGCACA TACTTNTTTT ACCCCTTANC TTTTTNAATA CCAACAGAAA 
ATTNT

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 10598810 [Map]; Strand: w
  - AT3G28345.1 - [+] show detail - ABC transporter family protein
    Distance: -35; Region: promoter
Flanking Genome Sequence: 53-3326-1 - 3-prime edge
```
AGAGAGAGTA ACAAACTCTT GTCGTTTCGT TAAGGTCAAG GTGTCGTTTT 
GTTCTCTCTT TCTGTCTCTT TAAACACACA CAAGAAAATG GGTAAAGAAG 
AGGAGAAAGA GAGTGGGAGG AACAAGATGA ATTGTTTTGG AAGTGT
```

AT3G28345.1

Model type: Protein coding
Short Description: ABC transporter family protein
Computational Description: ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, inflorescence meristem, cotyledon, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 17 (TAIR:AT3G28380.1); Has 822177 Blast hits to 385706 proteins in 4160 species: Archae - 14477; Bacteria - 641696; Metazoa - 17642; Fungi - 12086; Plants - 9535; Viruses - 48; Other Eukaryotes - 126693 (source: NCBI BLink).
Link: InterPro Scan - TAIR