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53-3370-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 707986 [Map]; Strand: w
      • AT1G03050.1 - [+] show detail - ENTH/ANTH/VHS superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3370-1 - 5-prime edge 
    TGACGCAGTT ACATCAACGC TTGCGTTAGC ACGCTTTCGA GACGCCTTAA 
    TAAAACCAAA TGCTGGACCG TTGCCCTCAA AACCTTGATT TTGATCCAAA 
    GGCTCTTAGG AGAAGGAGAT CAAGCCTACG AGCAAGAGAT CTTCTTCGCC 
    ACTCGCCGTG GAACAAGGCT TCTCAATATG TCTGATTTTA GGGATGTTTC 
    GAGGTCTAAT TCTTGGGACT ACTCTGCGTT TGTCAGGACT TACGCATTGT 
    ACCTTGACGA AAGGCTTGAT TTCAGGTAAG AGTTCTTGTG CTTGATCCAG 
    GTTCCGATTC GGGATTTCAA GTTATTTATG TAATTTGAAT GATATCTAAG 
    ATATGCGTTT TTTTTTTTTT TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 707870 [Map]; Strand: w
      • AT1G03050.1 - [+] show detail - ENTH/ANTH/VHS superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3370-1 - 3-prime edge 
    CTGCGTGAGT AAGAAGTTAG GCTAAGAATC TCTCTAATGT ATTTCTCTTC 
    TGCTGGAAAC TCTTCGTGAC GAGTGGCTTT GACGATGGCT ACCGTCAAGT 
    TCAGATAAAG AAGCCGCCTT CGACCATTGA CTTTGGCTAG ACCGACGCCT 
    GGTTTGGTCC TTTACGGCTC CTATGGCTCG TTTAAACTTA CTCGAACCCA 
    TTTTTATTCT GATTAGTTAG TAAATTTGTA TTAAAGACAA AAAAAAGAAA 
    AGAAAATATG TAAAAGAAAA GATTTGAAGA GAGAAAAGGG AAGAACGAGG 
    CTTGTTTTTA TTTTGTTTTT GTTTTTCCTC GTCGTTTCCT TTTTTCTCCT 
    CTGTTTCTTG TTTAGTTTTG TTTTGTTTCT TCTTCTTCTT CTTCTTCTTC 
    TTCTATGTTT TTGNTTGNTT GCTTCGTCAA TGTAGTTTCT TTGTTGTTCG 
    NCGATTATTC ACCATCTAAA GNCGCCGAGG TTATTGGAGG CTTTGTCC

AT1G03050.1

Model type
Protein coding
Short Description
ENTH/ANTH/VHS superfamily protein
Computational Description
ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: N-terminal protein myristoylation, clathrin coat assembly; LOCATED IN: clathrin coat; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT4G02650.1); Has 1509 Blast hits to 1324 proteins in 217 species: Archae - 4; Bacteria - 48; Metazoa - 522; Fungi - 214; Plants - 422; Viruses - 12; Other Eukaryotes - 287 (source: NCBI BLink).
Link
InterPro Scan - TAIR