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53-3382-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 12531839 [Map]; Strand: c
      • AT1G34340.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: 53-3382-1 - 5-prime edge 
    CAAGTTACAT AAAAGAATAT ATGTATATAA GTAATCACAA CTTTTCGTAG 
    ATTCATAAAA CTAGCCGAAC TCACAGTAAC AGAAACTCCT CCCAATCCTC 
    TATGGTTGCT AATAACAACA TTCCAACCTG TTTTTGCAGT GTCGTAAGCA 
    AGATGCTTTA AATACTACAA CAAAAAAAAA TCACCAATAT AAAGTCAATT 
    AGCCATTAAA GAACAGATAA GNGATTTAAA ACTAAACTTA CTGCAGATGA 
    ANAATCACTA GTTAACCCTG GAATAACAAC AGCTATAGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 12536490 [Map]; Strand: w
      • AT1G34355.1 - [+] show detail - forkhead-associated (FHA) domain-containing protein
        Distance: -7; Region: promoter
    Flanking Genome Sequence: 53-3382-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATGAAT 
    AAGTCTGTAA GAACGAACGA TTGAGAGATT TTCGAAAATG GAAAACGAAA 
    GAGATGAAGA AGAAGAAGAT TTAGAGAGTG TTTCTCTCTT TCTCTCTCTA 
    TCTCCTTCTG ATTTTGAAAA AGAGTCCGTT GTTGAATCCG ACGACCTCTC 
    TCTCTCTATT TACTCGTAAC GGCTAATTGT GGCATCATCT CTTATTACGA 
    CAATTTCAAA TTTTAATAAC CAAATTAAAC CCTTAATTAA TTCAAATTTA 
    GGTCGGTTAA ACACTAAACA CATGAATTTT TCATTTCATT TTTTGTTTGG 
    TATGGACATG GTCATCGATT ATTTATGTAT GTGCTTTTCT ACAATTTTTT 
    CATGCCTAGA AATTGATGCC AAATCATTCA ATTCGGGGTT TCAAAACTTT 
    AACCATAACA GACCGAAGTA GAATAATTTG GTTTGGTTCG GTTTGATACA 
    ATTCGATTCA ATTGAAAACG AAATACATAA AAGAGCAGCT TCTACTAAAA 
    AACTCAAAAC AGTTTTGATG CATTGTGTGA GAGTATACAT AANTGGGAGA 
    TTAAAAAAGN GGGATCATTC CTNCTTGGTA TGAGCAAGCC TTGCGCGATG 
    CCTGAGCTCA NCTNTTTTCN CTTTTCNATT AAGTNGCAAG CGAAAGAGGG 
    GGTTTATTTG GCAAAAACCC ACCCCTCAAG ANATTTTCAA TTCNCTCCCA 
    TA

AT1G34340.1

Model type
Protein coding
Short Description
alpha/beta-Hydrolases superfamily protein
Computational Description
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G49950.1); Has 2391 Blast hits to 2388 proteins in 904 species: Archae - 0; Bacteria - 1410; Metazoa - 329; Fungi - 194; Plants - 136; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G34355.1

Model type
Protein coding
Short Description
forkhead-associated (FHA) domain-containing protein
Curator Summary
Encodes PS1 (Parallel Spindle 1). Mutations in PS1 lead to diploid male spores, diploid pollen grains, and spontaneous triploid plants in the next generation. Female meiosis is not affected in the mutants.
Computational Description
PARALLEL SPINDLE 1 (PS1); CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Nucleotide binding protein, PINc (InterPro:IPR006596), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34110.1); Has 3416 Blast hits to 2816 proteins in 576 species: Archae - 6; Bacteria - 1040; Metazoa - 1174; Fungi - 342; Plants - 221; Viruses - 2; Other Eukaryotes - 631 (source: NCBI BLink).
Link
InterPro Scan - TAIR