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53-3395-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24213829 [Map]; Strand: w
      • AT5G60130.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -871; Region: promoter
      • AT5G60130.2 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -665; Region: promoter
    Flanking Genome Sequence: 53-3395-1 - 5-prime edge 
    CAAAGGACGA CCTTTGTCCG AACAATGTAA GTACTATTTG TATGAATCCG 
    TTGGAGGACG TTGCCCTACT TACTGCAGGC AACAAAGCAA CAAGATTTGT 
    CTAGACGGCA TAACTCAAGA GTTTGTTGCA AGAGAAAACA GAGAGATTTA 
    ATGAGACATG AACTCTATAT AGAAAGTCTT AATTCAACAT GAAAACATCT 
    CTCACGCCCA AATCCTTAGT TATAAACCAA ATCCTAAGAT AGACATTTTA 
    CCATTAGTAA CATAATAAAA ACCACTCACA GCTAAGACAC ATAAGACTCA 
    CAAAAGCTTA GTGAAGAGAT CATCCGCTGA TAATCTTGAC CTTGATGGTG 
    TGAACCAGAT TACCTCCAGT CCTCTTAAGC TCGCATATCA TTTTGTCAGT 
    CATCTTCATT TTGTTCCTTC TGATGAAACT ACCAAATCCC TTGACAAAGA 
    TGCAACCATT CTTTTGAATC TTGATTGCTT TCTCCAATGC TCCCATTTCG 
    TCCACGACTG TTATACGCTC CGGGAAGGTT AAGTCATAGT CCCTTATGAC 
    ATGAGCCGGT A

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24213713 [Map]; Strand: w
      • AT5G60130.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -755; Region: promoter
      • AT5G60130.2 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -549; Region: promoter
    Flanking Genome Sequence: 53-3395-1 - 3-prime edge 
    GTCCTTTGTG TTGGANTAAT NTCANAAGAC ATTATANNAA AATGACAAAT 
    GGGTTTGGGT TTGTGTTTTG TTGTTGGCAC CACCTTTTGT ATACAAACTT 
    ACAAATCAAA ATAAGAAAGA GAACCAAACA ATATGTTGCA AATAGATTTG 
    GAGGAAATCA CTAGGCCTTC CACTGACTAC TATAAAACCC CATCTCGAAT 
    GGGACCAAAA TAATTTAGGT CCATTGGT

AT5G60130.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60130.2

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60140.1).
Link
InterPro Scan - TAIR