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53-3431-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17491375 [Map]; Strand: c
      • AT2G41900.1 - [+] show detail - CCCH-type zinc finger protein with ARM repeat domain
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-3431-1 - 5-prime edge 
    GTGTTGGTAA CAAGATTGTT ATCTTCCTCG AAAGAAATTG GCAACGAAGA 
    TCTTGATGAC ACGATCTGGT TTAATCGGTC TGATCCACAG CACATAGTTC 
    CATCTGTGGA ATCGGATTCT GTAAACATCA TCAAAAGAAT CAAAAATTCA 
    ATCAAAAAGA TCACTTACAT AAAAGAACTA ATAAATCGAT CATAAAAAAC 
    CAAAAGAGAA TCTTTTTAAT TCTCTTATCC ATTGATTTTA CAGAAACTAG 
    ATCGGAATAG TACTCCAGTT AAGATAAATC TCAGCTAAAG TCACTTTCAG 
    ACAAGAAGGG AGGGTTTTTG TCTGAAAACA AGACCATGTC TTAACGATTC 
    CCAAAATCAA CCGTTTTTTG AAAAACCAGT AAGTCAAACA GATTTCAATA 
    AAGAATCAAG CAAAGAGGAT TTGTAAAGAC GCTACTTCTA TAAATAGAAC 
    AGGAAACTAA CAACAAGCAA TAAAATCCGA TCAGAAAATC CCAAATAAAA 
    ACTTCATCGA ATCTTTTTTT TTCCATAAAA ACAAAGTCAA ATAGGCAAAT 
    AGAGAAGAAA CTCAAATGGA TCTTTGTTGC ATGTTATTTC ACGACGTTTT 
    TTTCTCAAAA AATCCATAGA GACTACAGCG AAGTGAGCGA ACAAAGAAAG 
    GGAGAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17491491 [Map]; Strand: c
      • AT2G41900.1 - [+] show detail - CCCH-type zinc finger protein with ARM repeat domain
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-3431-1 - 3-prime edge 
    ACCAACACAG ACATGAATCA CTTAACAGTC GAAACAGAGG ATACGTTTGC 
    GAGCTTGCTT GAGCTTGCAG CTAACAACGA TGTTGAAGGT GTAAGGCTAT 
    CTATCGAGAG AGACCCTTCT TGTGTAGACG AAGCTGGTCT CTGGTACNGG 
    TCGTCAAAAA GGTTCTAAAG CTATGGTCAA CGATTACAGG ACTCCGTTGA 
    TGGTTGCTGC TACTTACGGA AGCATTGATG TGATCAAGCT

AT2G41900.1

Model type
Protein coding
Short Description
CCCH-type zinc finger protein with ARM repeat domain
Computational Description
CCCH-type zinc finger protein with ARM repeat domain; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: CCCH-type zinc finger protein with ARM repeat domain (TAIR:AT5G12850.1); Has 5399 Blast hits to 3519 proteins in 384 species: Archae - 10; Bacteria - 312; Metazoa - 2497; Fungi - 280; Plants - 489; Viruses - 8; Other Eukaryotes - 1803 (source: NCBI BLink).
Link
InterPro Scan - TAIR