Home
Mutant Lines
53-3473-1

53-3473-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26465652 [Map]; Strand: w
- AT5G66240.3 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: -520; Region: promoter
- AT5G66240.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: -552; Region: promoter
- AT5G66240.2 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: -552; Region: promoter

CTATAACCCC ACTGATACTT ATCACAGCGA AGCCGTGGCT GACTGTATCA 
AGTTTATCAG AACCAAGAAG GCCATCATCC ACCAGGAAAA CGTCCCGTAA 
CGCCCTTAAT TCTTATATTC TTCATTGTCA CCTCTTATTT GATTAGCAAA 
TTATAATTGG TGGAATAAAA GCTACCCTAC GTGTATACGC CTTGCTTAAT 
ATTTTTGGGA TTATATATTA GTATTAATCA TTTTCTTAAG TTACTCTTCA 
GTCTTCATAA GTTGACATCA AAACAAATCA TTACAAATTT ACGACCAACC 
TTTTTATAAT ATCCTGTACC GTAAAAACGA TTACTAAAAG AAGAATGAAT 
GTATGTTACT GTATTAGTTA CCAATATAAT ATGCATCGTG TAACTTCAAA 
TTTGGTATAG TGGTAGTTGT AAATATTGGT TATCATGTTC AAATATTGTA 
ATAAGTTTGT AACAAGTTGA TGGTAAGTCA ACGATCCACG GCTTTGCTGG 
ATGTTGGAAT GGAGAAGCGC ATCATTTGGG CCCATATTTA AAAGCCCAAA 
CTCAAAAAGT TGGCCCAAAT AGAAAATCGT TGGCATCAGT TAANGCGGTG 
GGAAGACGTC GATNCCTAAA GTCGAAGCCC TTGNTANGGC TTCTATTCAT 
CACCGGCGAT ATTGGTTTAC NCGTCGN

3 prime edge [+] show sequence

Chromosome: 5; Position: 26465542 [Map]; Strand: w
- AT5G66240.3 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: -630; Region: promoter
- AT5G66240.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: -662; Region: promoter
- AT5G66240.2 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: -662; Region: promoter

GGTTATAGTA CTTTTGGGTC GGCGTCTGTC TGGTATGAGT ATGACGGCGA 
GATGTGGACT TGGAGACGGC AGAGATCATG ATGAGGCGGA GAACAGCTTC 
GCGAAAACGG TCCAGGAGAT TCAGATCACT AGTCTCCCGA TTACCAGTGG 
CTCTGGAGTT GGTTTTTACA CGGGGGACAC ATCCGGCGCC AGAGTTCTTG 
GTCTTCATCT ACAAGCTGCT CTGATGATTA AGTGTTTCCT TCCTCTTCAG 
CTGTCGCATG TGGGGGTTTT ATTTATACAC GAGAATCTAA TTATAATCCA 
AGGGAGGCGC AGTTTTATTG TCAATTAGTC TTGTCTTTTG CATATTTTAT 
TAGTACAATC TCTAAGTGAT GAGACTTTCA AGTTCCAATA TCAAAGATAT 
AAAATCCTTT TAAGGCTGGT CAAGTTTAAG TTTTGGTGAA TGGTACATTT 
AATGTGTGTG TTTATAACAT GGTCGGGACA TTTTAAGGGT ATCTCCATCC 
ATGAGAAACC CACAAAGTTT CTCAAAAAAA AAAATTTTAA TNTTNTNTTA 
TAATTGGATT NTTNNATTAA AAAAGTNTTT TTGTTAAAAA ATTGACCCAN 
TNNTAAAATN AAAATTGNCN NNATGGGTTG NAAAAANTTT TNNAAANTTT 
NTNAAGGGAA AAACTTNAAC CCNCNCTCNC CTTAATTNNN ANAANNNNNA 
TTNNNNAAAT TGNAAAAAC

AT5G66240.1

Model type: Protein coding
Short Description: Transducin/WD40 repeat-like superfamily protein
Computational Description: Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G14530.1); Has 21938 Blast hits to 12469 proteins in 522 species: Archae - 46; Bacteria - 4852; Metazoa - 7701; Fungi - 4572; Plants - 2085; Viruses - 0; Other Eukaryotes - 2682 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66240.2

Model type: Protein coding
Short Description: Transducin/WD40 repeat-like superfamily protein
Computational Description: Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G14530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66240.3

Model type: Protein coding
Short Description: Transducin/WD40 repeat-like superfamily protein
Computational Description: Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G14530.1).
Link: InterPro Scan - TAIR