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Mutant Lines
53-3486-1

53-3486-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 24756541 [Map]; Strand: c
  - AT5G61560.2 - [+] show detail - U-box domain-containing protein kinase family protein
    Distance: 0; Region: exon11 (3UTR)
  - AT5G61560.1 - [+] show detail - U-box domain-containing protein kinase family protein
    Distance: 0; Region: exon11 (3UTR)
Flanking Genome Sequence: 53-3486-1 - 5-prime edge
```
ACTTCATCAA CGTTTGTGCG CAAGAATGGG TATGACAAAA CAAAAACCAC 
AACGATTCAT ATCACCTCGA CGA
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 11123680 [Map]; Strand: w
- AT1G31160.1 - [+] show detail - HISTIDINE TRIAD NUCLEOTIDE-BINDING 2
  Distance: 0; Region: intron3 (CDS)

GCTCCGACCA TGTATGGTTT CTCTTAATTT TGATTTCAAA GCAATCCATG 
TTTGTGTTTT TGCTACAAAT GATCCTAATC TTTCAAACAT GTGACCTAGT 
TAATTCTTCG TTATTGATTT GGATGTGATT CGTGGAAGTT TATGCTAGAC 
GCTCTTGTGT ATGTGTATCT TGTGGTTTTA GATTTGACAA GATTATAGCA 
AAAGAGATTC CCTCAGATAT TGTCTATGAA GATGAAAACG TTTTGGCATT 
CAGAGACATT AACCCTCAGG CTCCTGTTCA TGTTTTGGTC ATTCCCAAGT 
TGAGAGATGG CTTGACCTCG CTTGGCAAGG TGAGTCAGTT TTATGTTTTA 
ACATTCAATC TGTTTCTTCT CGTGACTTCC TTTGGTCTTG CTCTTAGAGG 
TCTCAAAGAA TCTCATCATT GTGTTCTGTA ACTAGTAACG CGTTTCATCA 
TGGTATTGTG CCACTGTTTC TGGTCAATAT ATGTAAATGC TGCCACCCAC 
ACTAAAAAAG GAGTTAAAAG TATTATTTTG GTGGAACAGA TTAAGATTTT 
ACCTGAAACA TATCTTCCT

AT1G31160.1

Model type: Protein coding
Short Description: HISTIDINE TRIAD NUCLEOTIDE-BINDING 2
Curator Summary: Encodes a member of the histidine triad nucleotide-binding family of proteins, but its activity has not been determined.
Computational Description: HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 (HINT 2); FUNCTIONS IN: protein kinase C binding, zinc ion binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad motif (InterPro:IPR011151); BEST Arabidopsis thaliana protein match is: HIS triad family protein 3 (TAIR:AT3G56490.1); Has 8225 Blast hits to 8223 proteins in 2654 species: Archae - 159; Bacteria - 5014; Metazoa - 405; Fungi - 167; Plants - 130; Viruses - 0; Other Eukaryotes - 2350 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G61560.1

Model type: Protein coding
Short Description: U-box domain-containing protein kinase family protein
Computational Description: U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT4G25160.1); Has 112471 Blast hits to 110615 proteins in 4538 species: Archae - 130; Bacteria - 13122; Metazoa - 41054; Fungi - 8748; Plants - 32669; Viruses - 288; Other Eukaryotes - 16460 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G61560.2

Model type: Protein coding
Short Description: U-box domain-containing protein kinase family protein
Computational Description: U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT4G25160.1).
Link: InterPro Scan - TAIR