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53-3491-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27201346 [Map]; Strand: w
      • AT1G72270.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR0...
        Distance: 0; Region: exon13 (CDS)
    Flanking Genome Sequence: 53-3491-1 - 5-prime edge 
    CCCAAAAGTG TGTATAAACG AGATGATATT TCCATTAGCC CTTCTAGGGC 
    AGATCTTTGC GACCACTCTG TATCGTTTCT GGAGGCGAGT GCATCAGTTA 
    TGACCTGATA CAACGATATC ACATAGCAAA TTCAATTGAG GAGTACAGTA 
    TTCTACACAA AGGACTCTTG ATGCAAACCA GACAAACAAA TATGGTTGAT 
    TATTGAGGAA TACTGTACAC ACCTCCAAGA CAACTACGAA GCGCGAATCT 
    TCATCTAC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27201230 [Map]; Strand: w
      • AT1G72270.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR0...
        Distance: 0; Region: intron13 (CDS)
    Flanking Genome Sequence: 53-3491-1 - 3-prime edge 
    CTTTTGGGTG ATGGATTAGT ATCAATGCAA GAAAATGGTA CTTCGGTTGA 
    TTTGATTTTG CAGATACTAT CTGCTACTCT AAAGATATCA CATAAACGAA 
    AAAAGAACCA GCCACATTTC ACCATCACAA TCGAGGGGAT ATTTCAACTC 
    TTTGAGGCTG CTGCTAACTG CGATTCTCCT CAAGTCGAAG CTAGTGCAGA 
    GGGTAGGCTT GATACTATAT TAATGAGCAC ACCGCCAGTT GAGATTATAT 
    GCATGGTATA ATCTCTCTTC CCCTTTCTTT GACTATTGAG CGTCCATCCA 
    AATTTGTTTT GAACAGTTTA AAATGTTTTT GTATCATACA ATATCTTTTC 
    AGGACGTGCA CAGGCTGAGA AGGTTTCTTT TGTGGGGATC CTCCACAGCC 
    TTGAAGAGTG ACCTTAAAAA GGGATCTAAG CCTGGTGAGT GTCATCAAGA 
    TACTAAAACA CACACTGAAG AGACTATGGT AGCAAAGTTT CTACGGTGGC 
    TGTTGGCTTC AGTGATTCTT GGGAAGCTTT ACTCTGAAGC TAATGATTCG 
    GACCAGATAG TCTTGAGCGA AACAAAGC

AT1G72270.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27010.1); Has 772 Blast hits to 657 proteins in 120 species: Archae - 0; Bacteria - 0; Metazoa - 344; Fungi - 94; Plants - 322; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR