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53-3643-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23407352 [Map]; Strand: w
      • AT3G63380.1 - [+] show detail - ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase famil...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3643-1 - 5-prime edge 
    CTTACTGTAT CCGCAAACTT CTTTAGGAAT TCCACCATAA TGACTTGAAG 
    CACAATAGTT ATCGCTATTA TTCCAATGAA CAACCTGTTT CTGTGAAGGC 
    CTTTGAACAC ATTTTTCTTC TCCATCTCCC TCGCATTGAA TTCGTTAAAA 
    ACTTGACAGA GCACNGAAAG TGTTGAATAT GAGCGTGTCC TTCACTTCCT 
    TGCGAACACN TGAATATTGA CATACCCTTG AATTGTAAGA TCAAGAGTAC 
    GGCTATTTGA TATAATGACT GAACCAGGAG ATTCCTCCAC ATGACATTTG 
    TTATCAGGGC CTCTGTTCGG CCAACTGGCT TTCTCTTCAG GAGCTCGTTA 
    GTGGGTCGCT CCGTGGCGAG AGCCAGAGCT CCCAATGTGT CCATGATGAG 
    GTTTACCCAC AGCAGTTGAA CTGCTGTCAA AGGGACCTCA CCGGCTGAAA 
    TTGCTGCGAT AAAATTGATC ACAAGAGCTG CAACGTTCAC TGTTAGCTGA 
    AACTGAATGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23407233 [Map]; Strand: w
      • AT3G63380.1 - [+] show detail - ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase famil...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3643-1 - 3-prime edge 
    TGAAGGCTTA ACGGGTGGCA ATGGGGAACT TGCATAGCAC TTGCATCCCT 
    TTCATGGCCG ATCGGCTTTT TCACAAAATT CATACCTGTT TCTGAGACAC 
    CATTCCTCAG TTACTTTAAG AATCCAAGAT CCTTATTTAA GGGTTCAAGA 
    AGCCCATCTC TCAAGAAACC TTGAGAAGCC TACCATAGCA GATGCAGTTC 
    TCTACGGATG GCTGGATAAT TGATGATCAG GAGCACAGAG TGGGACTCGT 
    CTGATAAGAT AACTTNNAGC TCCCTTGAAC GATCAAAAGG GTCAAATCTG 
    AAACCTTGAT GGTTCCCCAC CAAGAGATGC TTCTGATCAA AAGAGTCGTG 
    GAACACGAGG TTATGGTCAC TGGCTTCAAA GTTCTTTCAA ACTGCTGCAA 
    CAAGTTGGCT TTTCATCTCC TTCCGA

AT3G63380.1

Model type
Protein coding
Short Description
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Computational Description
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: calcium ion transport, cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G22910.1); Has 46574 Blast hits to 34715 proteins in 3214 species: Archae - 909; Bacteria - 32032; Metazoa - 4086; Fungi - 2666; Plants - 2162; Viruses - 3; Other Eukaryotes - 4716 (source: NCBI BLink).
Link
InterPro Scan - TAIR