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53-3788-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 587678 [Map]; Strand: c
      • AT4G01430.1 - [+] show detail - nodulin MtN21 /EamA-like transporter family protein
        Distance: 0; Region: exon6 (CDS)
      • AT4G01430.2 - [+] show detail - nodulin MtN21 /EamA-like transporter family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 53-3788-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAA GTATGCTGCA TTTTTAAAAT AAACGTATCA 
    GTGCATGCAT GCTTGGATCG ACCTTAGTTT GTTATATACT ATATAGAGTT 
    GATTTGAGAA TGAAACCTGC CAAGGTATAA AGGAGAGTGT AAGATGAGGA 
    AATCGAATAA CGTAGCGGCG ACGAGGCTGA CGGGGCTGAA TGTTGAGACG 
    AAAACTGCTC CTGTCATTTT TATGGACCAT GACGTTACCA CTGTCGA

AT4G01430.1

Model type
Protein coding
Short Description
nodulin MtN21 /EamA-like transporter family protein
Computational Description
nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G01070.1); Has 2489 Blast hits to 2481 proteins in 402 species: Archae - 14; Bacteria - 1085; Metazoa - 6; Fungi - 8; Plants - 1212; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G01430.2

Model type
Protein coding
Short Description
nodulin MtN21 /EamA-like transporter family protein
Computational Description
nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G11460.1); Has 1184 Blast hits to 1113 proteins in 28 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 1180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR