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53-3817-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14972176 [Map]; Strand: w
      • AT4G30720.1 - [+] show detail - FAD/NAD(P)-binding oxidoreductase family protein
        Distance: 0; Region: exon13 (3UTR)
    Flanking Genome Sequence: 53-3817-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAT GGGTCCGTCT TCTTCATCAT CCTCATCATT 
    ATCATCATCA GTACTTTACA AGTCCAGCAC CTTGAGCCTT TCCAATAACT 
    GACTCTATGG TTCCATCAAA GAGATCAAAG CT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14972168 [Map]; Strand: w
      • AT4G30720.1 - [+] show detail - FAD/NAD(P)-binding oxidoreductase family protein
        Distance: 0; Region: exon13 (3UTR)
    Flanking Genome Sequence: 53-3817-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    TTCATCCATC TTTGTTTGTT CGGCTTTTGT CGAGGTAAAA GAACATCAAG 
    GGGGACTGCT CCAGAATCCA GTTTTGTTGT ACCATAGCTC AAGGACTTAT 
    ACAGAAAAGG CCCAAATCAG AAGCGGGAAG GAATCATCAT CAGCAGCCAG 
    AAGAGAATTT TGCCTTAGTT ATGTAACTAA CCCAAACAGT AGTACTGAAG 
    AAAGTAAGCT AGTGTATCCA ATGACTATCT TTTCATCAGT ACTGTTATGA 
    AAATTTACTT CATCATTGTT TAGTGGAACT ACAAATGGCT TCTAGGTCAA 
    ATCATGTTCC TTCGTTTTCT GCTTATGGGT TTTGCAGTAA CTGATACGAC 
    TCAAACAACC ATAATCACCC AATCTAAGTA GTTCCAAATA CATTTTGATA 
    GACATTATCA AAGGCAGTGA CTCTTGTTCA TAAGAAACAC AAATGGTTAA 
    AAAAAAAAAA ANNNNNNNAA TTTTNTNCNN NAAAANAAAA NNTTANNGGN 
    NCCCAAAANA TTTTNTTNGG GNAANCNCCC CCCCCTAANC NTNTTTTGGG 
    NAANNGGGAN NAAAAAANCN ANAGGNTNCC CCNTNGGGCC NGTTTTNGAG 
    NGGNNNNNNA AAAANGGNNN NTTTTNCCNN CCCNNCCCCN NNNNNNAAAA 
    TTTNGGGGGG GGGGNNNAAA NTTTTTTTNN NNNGGAACTT NAANNNNNNN 
    NNTTTNNNAN TTNNNNTNNG GCNCCCCCNT TNAAAN

AT4G30720.1

Model type
Protein coding
Short Description
FAD/NAD(P)-binding oxidoreductase family protein
Curator Summary
Encodes a putative oxidoreductase/electron carrier detected in the chloroplast stroma that is essential to ensure a correct electron flow through the photosynthetic chain and, hence, photosynthesis efficiency and normal growth. Mutations in the Col-0 allele result in pale green pigmentation and defective growth.
Computational Description
FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, FAD binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Adrenodoxin reductase (InterPro:IPR000759), FAD dependent oxidoreductase (InterPro:IPR006076), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); Has 2466 Blast hits to 2466 proteins in 951 species: Archae - 126; Bacteria - 2117; Metazoa - 0; Fungi - 2; Plants - 26; Viruses - 0; Other Eukaryotes - 195 (source: NCBI BLink).
Link
InterPro Scan - TAIR