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53-3818-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 325629 [Map]; Strand: c
      • AT5G01840.1 - [+] show detail - ovate family protein 1
        Distance: 113; Region: intergenic
      • AT5G01849.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -6144; Region: intergenic
    Flanking Genome Sequence: 53-3818-1 - 5-prime edge 
    GTATATATAG TATGATTGAT GACGCAAAAG TAGGTTTATA GTCGTCCACA 
    TTCAAAATTT GATTTAAAGT AACACGCTGC TTGTCCGTGC AAAGTAAGAT 
    TCGTAGAAGA GTACCAATCC GGATAGAAAA TTCCTGTACT TGATATCATC 
    AACGATGGCC GTTATGCAAG TACAAGACTG TAGGCTCTCT CTAGACCATT 
    ATTACATATA AATATAGTTA GTACAAGAAT CATCATCATC AACATCATAT 
    ATATTTACAT TTTTATTCAG TAGAGCGATT AATTATTAAG GAGTAATTAA 
    TACTATATAA GAAGATGTTT TTTTTCTTAA TAATAAAATT ATTTGGAATG 
    GGGTGGTGGA AGATTAAGAT CAAGCCAGAT TTGCTTGAAG ACATTGATGA 
    TAATAGCGTG ATATTCGTCT GAATTGAGAC AGAGATAGCA AGCCAAAAGC 
    TCCTCTAGAT CCTTTGTCGC TCTTATCTTG TTCTCAGCGA TCATCTCCTC 
    CATCGACTCC TTAAAGTCTC TCTTCGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 325745 [Map]; Strand: c
      • AT5G01840.1 - [+] show detail - ovate family protein 1
        Distance: 229; Region: intergenic
      • AT5G01849.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -6028; Region: intergenic
    Flanking Genome Sequence: 53-3818-1 - 3-prime edge 
    ATATATACAG CTCACTCTTC AAGTCTAAAT TTTTTAAAAG AGATTTAAAA 
    ATGATTGGAA ACTCATTCAT TGTGATCATG AGTTAGCAAG TGTTCATGTT 
    GACAACAATT ACTCTGCATC ACGTTATAGA CTAAGACTAA TAGTGAACGT 
    TTTATATTTA GTGTATCCAT TATATTAGAC CTACGATGCC GACAATTCAT 
    TAAAACAGCA TCTGCGCCTA TTTTCAGACC TAACTTTGGA TATGTGTGTA 
    CGTGTGCATT TCTCAATTTC ACACATCTAT ATTTATTTAT TTATATGTGT 
    AGTTAACTTT TAAAAAAATA AAAAAAAATT GACCACGACG TATTGTTTTG 
    TATAATATTT ATATGTATAT GCATGCAGTG CATAACACAT ACAAACAGTG 
    CGACAAGCAA GAAGAAAACA AAACATTTTT ACTTTTAGGC ATATAAGTGC 
    CAAAGAAAAC AAAAAATCCA ATTGGCTGTT TTTTATTTAT TTATATCAGT 
    GATGGGTGAC AAATGACGAG AATATATAGG AAAAGGTAAC ATATCGGAAA 
    AAATAAATTA TATGAATATA TGTAGATATT ATAGTAAAAT AAAATAAAAT 
    TAGTGATGAA TGGTTCTTAC TGGCAAACTT TTGCTTCTGT GTTTTATGGT 
    TGNATCGTTA TCATGATATT GATGTCATTT TGTTTTATGT AAATCTTCCA 
    TGAGATTTTG GTTTAATAGA GTTAN

AT5G01840.1

Model type
Protein coding
Short Description
ovate family protein 1
Curator Summary
Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation.
Computational Description
ovate family protein 1 (OFP1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: N-terminal protein myristoylation, regulation of unidimensional cell growth; LOCATED IN: nucleolus, cytoskeleton; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 3 (TAIR:AT5G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G01849.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR