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53-3825-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 8181888 [Map]; Strand: w
      • AT3G23030.1 - [+] show detail - indole-3-acetic acid inducible 2
        Distance: -88; Region: promoter
    Flanking Genome Sequence: 53-3825-1 - 5-prime edge 
    GNGATAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCTG ATGAAAGGCA AGAAAGAGGC AAGGGGACAA 
    AAGTGGGACA CGAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 8176235 [Map]; Strand: w
      • AT3G23010.1 - [+] show detail - receptor like protein 36
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3825-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCTTGCC 
    TGACAAGTTC AGAAGACGCA GTTCTCTCAA TAGACCAATA GACCCAGGGA 
    TATGTCCGGA GAATCGGTTT CCAGAAAAAT CAATAGCACT AAAGCCTTCA 
    AAGATACGAT CAAAATCCGT CTCTACTCCT TTGTACACCA AATCGATCGA 
    ATCATACNGT ACTAAAATTA ACATTTCCCA TATATTTAAA CTGTGGGATG 
    TCCGAACCAC TCCACACCAA AGACATTTCA AGCCAATTGG CAAAATAGTC 
    TTGTGGCAAT GATCCAACAA AGTTGTTATT GGATATATCA ATGATCCTTA 
    TACTTGGAAA CCCCAAATAT GCGGAGGGGT TATAGACGGG ACCATAAAAT 
    GCATTTGATC CGAGCATAAG AACTTTTAAA TATGGTAGAG ATCCCAACCA 
    AAATGGAAAC GTGTCCATGA TTTTGTTTCC TTTCACATTC AAAAATTCAA 
    TCCTCTCGCA GTTGATCAAC GATTTTGGAA GTTTACCCAC CAAATTATTG 
    CTGCTAACGT CAAGTGATCG CAACTGAGAG TCCTTAATGA ATAAATTTGG 
    TAGAACCCCA CTTAGACTGT TGTTTCTCAG ATTTAACGTA TGAAAATAAG 
    TGGAATACTT CAAACATTGA GGAATGGAAC CATTAAAATG GTTGTTGGAC 
    AAATCCAAGG CGTATAAATC TTTAACCTTG CATATCCATT TGGGGAATGG 
    TCCGTCGACT GAATTTGAAC CAAGA

AT3G23010.1

Model type
Protein coding
Short Description
receptor like protein 36
Computational Description
receptor like protein 36 (RLP36); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 38 (TAIR:AT3G23120.1); Has 98934 Blast hits to 26273 proteins in 1049 species: Archae - 38; Bacteria - 5801; Metazoa - 19602; Fungi - 835; Plants - 65537; Viruses - 10; Other Eukaryotes - 7111 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G23030.1

Model type
Protein coding
Short Description
indole-3-acetic acid inducible 2
Curator Summary
auxin inducible gene expressed in the nucleus
Computational Description
indole-3-acetic acid inducible 2 (IAA2); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible (TAIR:AT4G14560.1); Has 2163 Blast hits to 2162 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2162; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR