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53-3850-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22371911 [Map]; Strand: w
      • AT1G60780.1 - [+] show detail - Clathrin adaptor complexes medium subunit family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-3850-1 - 5-prime edge 
    CGGGAAAAAC TAACAAAATC CGGTTATACG ATAACGGTCG GTACGGGATT 
    TTTCCCATCC TACTTTCATC CCCACAAATG GGGATGATTA ATCAGCGAGA 
    TCTGATGAAA TTATGGTTCT ATAGAGGAAG AAGTAGCACC ACCATCTAGA 
    TGGGAGAATT GACCNCAAAN TCTGCAGCTC ANATTCTNCA TTTCCCAATT 
    TTTTTTTTTT TTTTNGGGGG AACCNGGGAA AATCCCCNTT NCAACCCTTG 
    GGGGGGGGTT AAAAAAAACC GGGAATTTTT AAAAAATNTT TTTTTTAAAA 
    AAAANGCTTT NTNTTCNCCC AAGGGGGNGT TTNNTTTTTC CNCNATTTTT 
    TCCCCCCCNN NNNGAGGGGG NNCNTTNAAA AACCCCCTTT TAAAAAAAAG 
    GCCCCTNTTT TTTTNAAAAA ACCCCCCCCC NANGGGGGGN GTNNNGGNAA 
    AATTTTNNGG GNCCCCCNAT TTTTTAAAAA NGGGGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22371914 [Map]; Strand: w
      • AT1G60780.1 - [+] show detail - Clathrin adaptor complexes medium subunit family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-3850-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAT 
    TTGGATCTGA TCGAAACTCT TAGGGAAGAA CATGGCAGGA GCTGCCTCCG 
    CGCTGTTTCT GCTTGATATC AAGGGACGCG TTCTCGTCTG GCGTGATTAT 
    CGTGGCGATG TCTCCGCTGC TCAAGCCGAG CGATTCTTCA CTAAGCTCAT 
    CGAGAAAGAG GTTGTTCTGA TCTTCCTCTT ATCGCTAATT GGTCTTTGTT 
    TATTGCTTGG TTACTGTAGA ATTTTCAGAG AAACATAGAG TTAGCGAACG 
    AACTTGTAGA TTTGTGTTTG AAAGATTCGT CAATTGGAAT TGAAACATTT 
    CGAAGATAAT GGATTCGTGT CCATTTTCAT CTGCACTGGA AATGAATTTT 
    GAAGATAATG GATTCGTATC AGTCTTTGTG ATCTGATGCC GCTGAAATTT 
    TTTGGAAGTA ATGAACAAGT TTGATCATTG GTTAAATGTT TTGGATTAGA 
    ATTTGATTTG AATCTGTACT TTTGAAGCAT TCTGGTTTAA ATCAGAGTAA 
    TCATCGTTTT GTTTAATTGT TCAGGGTGAT TCACAGTCAA ATGATCCAGT 
    TGCTTACGAT AATGGGGTGA CTTATATGTT TGTACAACAT AGTAATGTAT 
    ACTTGATGAT AGCATCCAGG CAGAATTGTA ATGCTGCCAG TCTTCTCTTC 
    TTTCTTCACC GCGTTGTCGA TGTAAGTATG GCTGGTCAAT TCTTTAGTTT 
    TTCTCTTAAG GTCCATCTTT TT

AT1G60780.1

Model type
Protein coding
Short Description
Clathrin adaptor complexes medium subunit family protein
Computational Description
HAPLESS 13 (HAP13); INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G10730.1); Has 2206 Blast hits to 2139 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 1107; Fungi - 506; Plants - 213; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink).
Link
InterPro Scan - TAIR