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53-3855-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24145263 [Map]; Strand: w
      • AT5G59960.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-3855-1 - 5-prime edge 
    GATCTATTGT CGCTAGTATG AGAAATCGAG AGAATGATAA TGATTGCTTC 
    TTCGTTACGA ATTATTTTAT TCAATCAATC AATGAATGGG GTCTCCTCTG 
    GATTTAAAAA TTAGTCGTAA TTAGGCGTGA ACTTCTTTTC TCTTTTGCTA 
    CTGTGAACTC CGATAAAGAC ACGAGAGGAA AAAACGAAGA TATTGTTTGT 
    TTCAAAACGA CGTCGTTGCA TTCTGGATCA GAGAGATGAC GTGTTGGTTG 
    GCTGAAGACA CGTGTACCTA TTCAGGCCCC TCTTTATTTT TCTTTTAATC 
    TTTTTTTTTT TNTAAAAAAA ATNANCGNCN TNGGGGNAAA ATAGTTNCGG 
    AANGAAATNG ATNAANGNCG TTTNGTNTNT TTTNAAAATT NGTTNTNCAA 
    TNCNACANTT TNTTCNTNTN NCCTTNTTTN AAATNNGTTT CCANTTNTAA 
    AAATGGGANN ATTNGATNCA TNAAATNCAA AAANCCCTTA AAATNCCACT 
    NTNTCCTTTT TAAAAGGGAT NAANACCTCT TTNTCCANTA CCNCTCGGGG 
    CAAAANGAAA NCTTTTTAAA NTCANCCCAA ANTAGAGGGA AACTAAAATT 
    TACCCCCTAT TGAGTAANGT NGGTAAAAGC TACCAGCCGG GGCCGAAACC 
    NCGNGNNNNC NTNTNA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24145147 [Map]; Strand: w
      • AT5G59960.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-3855-1 - 3-prime edge 
    AATAGATCGA CGCTGTTGAT CGCATGTGGT AGTTCCTTTT TGGATCAGTG 
    GTTTTTGAAA TGGAGAAAGT TTCGTCGCCG TCTTCCTCTT TTTCACGGAG 
    GTCTGCTTAT CTTGAAGCTC TTACACAAGA GATTAAGAAG AAGCT

AT5G59960.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR