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53-3860-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23218838 [Map]; Strand: w
      • AT5G57330.1 - [+] show detail - Galactose mutarotase-like superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 53-3860-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT TAAATCATTA CGTTTTTTGT TTAATTTGAG 
    TTGGTGAACG AATGCAGGTA TACTTGTATG GAAGTCATGT AACTTCTTGG 
    AAGAATGAGA ACGGAGAGGA GTTACTTCAC CTCAGTAGCA AGGTACTCCT 
    CCATATCTAT ACCATCTTCC ACTTGATCAC GAAACGGGAC ATTTGGTTCA 
    TGATTAATGT TTCCAACTTC GTTAGAGATG ATATGGCCTC TTATGAAGTT 
    CAAATTGATG CTAAACATTT ATGTATCTCA TGTTATTTCT CTGGTTGATT 
    GTGTCTCTAT AACGCTAAAG ACACAATCTA GAATGATTGG CTCACTAAAG 
    CTGATGAAAG ATTTGGGAAA ATCTTTGCCT AAATTTTGCT ATTTACATCG 
    ATCATTATGT AAACTGAGAA AGGATCTTCA CTTCATTTTT TGCTTAATTT 
    CCTAAAGAAG TATGTGACAG AACAGACAAC ATTTTACTTT GAAGTCTAGT 
    AATTTGCTCA TACTAGAATA GTCTTTCTTG CTCGGTTATT TGTGTGTTTT 
    AGCTACAAAT AATAGAAATG AAACCATGTG TTATGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23218833 [Map]; Strand: w
      • AT5G57330.1 - [+] show detail - Galactose mutarotase-like superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 53-3860-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAG 
    AACAGACAAA GATGGAGATC AATAAATTTG CAGAGAGCTC ACACTTAATA 
    ACTAATAAGA TGATCAATTA TTCAAAAAAA ACAATTCACC TCTGAGAAAG 
    CATCAACAGA TTCATAGATT ACACTAAACA TTAATTTTAC ACATTCTTCG 
    TCGAAGATAA ACACGCAGAT CCGGTTCTTC CATTAACACA AATTGCATAA 
    ACAAATACAG AACTCAATAA CACTAGAGCT AAAACCCAAG GATCTAAGAG 
    ATTTGCAAAT CGTAATCATA CTACAAAAAT CGATCTCCAA TCAAATTGAT 
    CTAAATCTCA GATCAACTAG AGATAGAGCA CGACGCCGCG TGAAAATTTA 
    CCTCTGCAGA GCGGCCGCGA GACTCGCGGA GAACGATCTT ATCAAGGCCA 
    TTGATGCCTT TAGCAAGCTC AAAATGATGA CGCTCCGTCG CCATGGAGAG 
    TACCAAAAGT AGAAAAAACA AAAACAGGAT CGAAATCCTG AGATTCTCCG 
    TATATATCGT CGTTTCTAAT CTTCTTCTCT CACTCACTTT TTTTCCTTTT 
    TTTCTTCACT GCTTCTTCAC GCAAAATTGG AAAAAGGTTG CTGCTCCCCT 
    TTTTTTTTTT TNNGCCNTTT TTNNNAANAA NGGNTTTTTT TAAANAACCC 
    GGGGGGNNTN NTAAAAAATN NGGGGGGGNN NNNAAAAANT NNGGGGNNNG 
    GGNNCCCCCC CCCNAANNNT TTTAAANAAA AN

AT5G57330.1

Model type
Protein coding
Short Description
Galactose mutarotase-like superfamily protein
Computational Description
Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G61610.1); Has 1923 Blast hits to 1920 proteins in 763 species: Archae - 0; Bacteria - 1269; Metazoa - 39; Fungi - 135; Plants - 272; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink).
Link
InterPro Scan - TAIR