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53-3866-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19667018 [Map]; Strand: c
      • AT2G48080.1 - [+] show detail - oxidoreductase, 2OG-Fe(II) oxygenase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3866-1 - 5-prime edge 
    GCTGAAACGC CGGCTTCTCC TCCTCTTCAC CCTCCCGTTG TTCTTTTGTC 
    CGATTCCGCC GCCAAGGACG CCATGCTCAC TTGGTTTCGC GGCGAGTTTG 
    CGGCCGCCAA CGCCATCATC GATGCTCTCT GCGCTCACCT TATGCAGGCC 
    TCCGGCGGAT C

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19667134 [Map]; Strand: c
      • AT2G48080.1 - [+] show detail - oxidoreductase, 2OG-Fe(II) oxygenase family protein
        Distance: -42; Region: promoter
    Flanking Genome Sequence: 53-3866-1 - 3-prime edge 
    GTTTCAGCCA TCAGTTAACG AAAGAATGGG ATCGGAGGAG GTTTTGGGGG 
    GTTTAAGGGC TTGAATGCTT TGTTGGATAC TAAAATTTGT AATAATAAAT 
    GTTTCTTTGG TTTTGGTTTA GCCACAAAAT TAATAATACA AGTAAAAAGC 
    TCTAGGCATG GATGATGTTT AAATATAGGT AGGGGGGGGG AGGGACAAAC 
    TCAACTCGAC TCGACTCCAT CGTAATTATT GACTAAACCA TAACTTAAAA 
    AAAATAAAAT TAAGTTGGAG GAAAGTGAGG ANAACAAGTC CTTCNATCGA 
    GTCTGTTGNG GCCATATCAT TTANCTTTCT TNTTCCCACA TTGCCCCTCA 
    GGAAAAAAGT CCTNTCNCTT GCCGGAAAAN ACAAAAATCT CTTTCTTTTC 
    TCTACTAGGC CGTTTTCGTT CGTATCATCC ATCNTTCCAT GGTTTGGAAC 
    TAATTATCTA CCATAACTGG CCTTGCCTCT CTCTATATAT CTTTATTATT 
    GNCTCCTAAT CTGCTATAAT ATNACTGCCT CTNTCTCTTT CGTAATTTTC 
    TCGGTTCCAA AACATTTTCC TACGTTTTTT TTACTCAATT AAANAAANAT 
    TCAANACCTG TTGCAATTTT TCTACACCTT TTTCTAATCA TCCATAAAGT 
    CNACTTCCCT TTACGTTTTC CACGTGTNGG NANNAAACTT TTCTTTTCTC 
    AATA

AT2G48080.1

Model type
Protein coding
Short Description
oxidoreductase, 2OG-Fe(II) oxygenase family protein
Computational Description
oxidoreductase, 2OG-Fe(II) oxygenase family protein; BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G02940.1); Has 179 Blast hits to 160 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 24; Fungi - 0; Plants - 151; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR