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53-3867-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3243956 [Map]; Strand: c
      • AT5G10320.1 - [+] show detail - unknown protein; Has 54 Blast hits to 53 proteins in 19 species: Archae - 0; ...
        Distance: 0; Region: exon14 (3UTR)
      • AT5G10320.2 - [+] show detail - unknown protein; Has 54 Blast hits to 53 proteins in 19 species: Archae - 0; ...
        Distance: 0; Region: exon14 (3UTR)
    Flanking Genome Sequence: 53-3867-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGAATAA 
    TAATTTCAGT TGTCTTACTG TGAAAGTCTT CTCTTTCTGA TGATTTTATT 
    TTTTTTGTTG GTGACTTCAT GTTNATTGCT TNAGACTTTC GAATAATGTT 
    GTAAGACAAA TTTNGAAAGG CGACAAATCA GGTNACAGTG GAAAAAGATA 
    GTCGCCTGAT CGGTATCACG CNATTCCACG AGAACGTNAG GCTCACGGCG 
    NGGNACCTTT GNGTATCANA GATTTNGCCA AACNCCTCTC CGNTATTGAT 
    CCNGGCGNCC TTNNAAANGA AGTTTTCANA GGAATAAAGG ATGTTCTCNC 
    NGCCCCCGGG AAGANGGNCT NNTCTCCCCC CNCNCANNNA AANANNTNGG 
    GGNGGNNGNG NGGGNCCCCC CCNTTTNNAN AAANNCCCNC CCCCCCNNCN 
    ANGAGNGGNC CCCNCCNNNC NCNANNGGTA AANACGCAAC ACCCTCCCCC 
    CCCCGANAGG AAAANAAAAG GNGCCNGGGT TTTTTCGGNN GGNNGNCNNC 
    CCCNNNTTTT GNGNGGGGGG GGGGGNTNCT NACCNCANAG AACNGGGGCC 
    CNGGTNCCCT NGNCCCAANN CCACCNNCCC CANGGGGGAA NTTTNTTTTT 
    CNGGGGTAAA AAAAAAANNT TCNTTTTATA AAAAAAAAAG ANNACNNTCN 
    CTNNCCGNGG GTGNGGGGGG GNGGGGCCNG GGNGGCGCCC CCCCCCCCCC 
    CANGGNNNGN CCCCCCTTTT NNCNANAAAA ANNNCNNGTT TTTNCCAAAA 
    NANAAAAAAN NNCCCCCGGG GGGGGGGGGG GGGGGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 10348882 [Map]; Strand: w
      • AT5G28400.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -648; Region: promoter
    Flanking Genome Sequence: 53-3867-1 - 3-prime edge 
    TTGAAAACGG CAGNAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    CTGCCCACAA GTCCCTATAG TTAGTACTTC ACATAAAGTT TTACATGTAA 
    CTTAATTATA TAAATGGAAT AGTATTATAC CGACTTAGAC AGATACTAGG 
    AAACAATTTT TTTTTTTTTT TTTAAAGGGG GGGGGGAAAC CGNACCNAAA 
    AACCTTAAAA ANCCCCNNAN AAAAAAAAAA AAAAAAANTT NTCTTTTTNA 
    AAAAAAAANA NNNNANCNNN ACNGTTGNTN NAAAAAAAAN NAANTNNTTT 
    TTTCAANTGN CNNANAANAA AAAANCGGGG GGGGGGGNCC CCNGNNAAAC 
    NTTTAAAANA AAAAAAAAAT NNTTTNGNNA AAAAANAANN GGGCNNAAAA 
    NNNTTGNNNC TTTNNNNNGT NAACNNNGGN NAAANGGGGT TNNGGNTGNT 
    TTNNNTNGNG ANNTTCCACN CNCCGGGGNC ACCNGGANNT CGTGGNCTGG 
    TGNTNNTGNN CGGAAAGNNN NTGTNNNNTG AACGANGNGC TTNTTCNGNN 
    NNGANGTGGN NNNNGCCGAC GGNNTANNTN CNACGTANAN NNANGTANAG 
    GCACCCNACN AGNNGNCNAN NNANANAANG CATANTNNNG NNNGGNANNA 
    TNNCGNTATC TAANCCANAN CGNNNGGNAN AAGNNAAGCC NCCGNNNGCG 
    NNNGNGANNA GANTGCGNCN GATATNTNGG TNCTTNTNNA NGCTGNNANT 
    CTNNTAGGCG TANNNNANCT ANCNGAGNGG CCNNAGGNGN ANNCAANANA 
    ATNCCNCANA CGACNACNGC GNNGGGCNGN

AT5G10320.1

Model type
Protein coding
Computational Description
unknown protein; Has 54 Blast hits to 53 proteins in 19 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G10320.2

Model type
Protein coding
Computational Description
unknown protein; Has 54 Blast hits to 53 proteins in 19 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G28400.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28320.1); Has 2580 Blast hits to 2028 proteins in 270 species: Archae - 20; Bacteria - 158; Metazoa - 939; Fungi - 198; Plants - 144; Viruses - 14; Other Eukaryotes - 1107 (source: NCBI BLink).
Link
InterPro Scan - TAIR