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53-3885-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26269367 [Map]; Strand: c
      • AT5G65690.1 - [+] show detail - phosphoenolpyruvate carboxykinase 2
        Distance: 0; Region: exon10 (CDS)
    Flanking Genome Sequence: 53-3885-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT AAGTCATAAG CCATTTTATC AGGCCACTGC 
    ACAAGACACA CATAACCAAA GATGTCAAAT AAATGGGTTA ATTTCATAAA 
    AAAAATATAT ATGTTTTCTG CTGTCTATCT AACTTACTTG CATTAATAGG 
    TTCCAGTATC TCAGAAGGAA CTCCTTCTAC TTCATTTGGA ATCTCCAAAC 
    CAAAAATATC TGTTTTACGG TAACTTGCAT TCAATAGACT ACCGGAATGT 
    ATAGCATCGA TAATCTTTCG TGTATACGCC AACTTGATTC GGCTTCCAGT 
    TCCGTAGCTG CATATTTTTA TCATCAATTT TAATACTCTT TTTGTTTGTT 
    TAGCTAGTTG GTTATAACTG CAGTAGAGAT GGATGGTTAA CCTTCCACCG 
    GACCAACCGG TGTTAACAAG CCAACCGGTG GCTCCTTGAG CCTGCATTTT 
    CTCAGCCAAC ATAGCAGCGT ACTTGGTTGG GTGAAGCATA ATGAAAGCAG 
    CACCAAAACA AGCTGAGAAT GTCGCTCGAG GTTCCTTAAC TCCTTCCTCT 
    GTTCCTGCAA CCTACAAAAT CACATTATTC TTTACGAATC GATTACAAGA 
    AAACCGAACC GAACCAAACC GGGACTTACG AGAGCAGTGT AGCCACTGAT 
    GAAATGGTAC ATAGTCTGAG CAAGATTGAG CTTGCTGATT GGCGGCAAC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26269411 [Map]; Strand: c
      • AT5G65690.1 - [+] show detail - phosphoenolpyruvate carboxykinase 2
        Distance: 0; Region: exon10 (CDS)
    Flanking Genome Sequence: 53-3885-1 - 3-prime edge 
    CTTATGAGGA CACATTGTTG AAACTGGCTG GTTTGTTTAA AAGCAATTTT 
    GAGACATTCA CAAGTCATAA GATTGGTGAT GATGGAAAAT TGACTGAGGA 
    GATTCTTGCA GCTGGTCCTA ACTTCTAAAG TGATTGAAGA TGATGATGAA 
    AAACAAACCT TCTTACTAAC CAAAATAAGA CAACTATTTT TTTTCACTTC 
    CCAATTTTTT CCCATTTTTT GTTAATGACT TCAGTAAGAA CGGCAATTTT 
    AAATAAAACG AATAATGTCA AAAAAAACAC CAATTTGTTT TGGTGTCACC 
    TTTGATTTAT CTGTCATATA TTTCCAATTG AAATGAGAAC AATTCTTTTA 
    TTTTCTCTCT TCCATGAATG TTCAAGTATG GAGATATTTG AACATGTTAT 
    TAGCTATTAA CAAAAACAGA GAGTGAACAT AAGTAATAAA AAAATCCATG 
    AAATTAAGAA ACAATTGTAA TGGTTGAATC TTTTAGGGAA GCTCGAGAAG 
    AAAAATTCCC TCTCTAAAAC ATATTATTCC AAAAAATTAG GTTTATGTAC 
    ACAAAAGAAA CAGAGAAATA GTATCTATAA GGAAAAGAAA ATGAATCAAA 
    TGAATTGTTG TTCAATTAAA CAATGGAGTA GGACTAAGGA ATTATTTGGG 
    TCGTGTAGAA NAAGAAAATT GATAAAAATG TCTTCAAAAA TTAGGCGAGA 
    GTAA

AT5G65690.1

Model type
Protein coding
Short Description
phosphoenolpyruvate carboxykinase 2
Curator Summary
Encodes a putative phosphoenolpyruvate carboxykinase (ATP-dependent).
Computational Description
phosphoenolpyruvate carboxykinase 2 (PCK2); FUNCTIONS IN: phosphoenolpyruvate carboxykinase activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, ATP binding; INVOLVED IN: gluconeogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, male gametophyte, root, flower, trichome; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Phosphoenolpyruvate carboxykinase, N-terminal (InterPro:IPR008210), Phosphoenolpyruvate carboxykinase (ATP), conserved site (InterPro:IPR015994), Phosphoenolpyruvate carboxykinase, ATP-utilising (InterPro:IPR001272), Phosphoenolpyruvate carboxykinase, C-terminal (InterPro:IPR013035); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxykinase 1 (TAIR:AT4G37870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR