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53-3919-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 416167 [Map]; Strand: w
      • AT4G00960.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 53-3919-1 - 5-prime edge 
    ATCGTCAAGA GACAACAATC ATACAAGAAA CCCGCGTATT GCGTCTTTGA 
    ATGATGTTAC AATTACGGAG TTAGATCCTC GTTGATTAAC TTTGTAAGAG 
    ACAAAAATGA TTTTTTCTAT TGCTTTAAAG TTTACTTCAG AATGTATCAG 
    TATGATTTTT GGTTATGTTG TAAAAGACTT GTTAAGCATG AGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 416051 [Map]; Strand: w
      • AT4G00960.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 53-3919-1 - 3-prime edge 
    TTGACGATGA GTCTACAACT CCTGAGTAAA AAGCGGGTTG CAAGGGTCTC 
    GGTAAAGTGA AAGAATTTGC ATTGAGCATT CTAACAATAG AAGCCATTGT 
    TGGTCTACTC CCTGGATTCT CCTGAACACA CAACAAACCA ATGTGAATGC 
    ATTTCCTGAT CTCATCACTT AGACCTCTTG TTTCAATCAA ACTTGGATC

AT4G00960.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem, leaf; EXPRESSED DURING: LP.10 ten leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 41 (TAIR:AT4G00970.1); Has 115688 Blast hits to 114341 proteins in 4243 species: Archae - 87; Bacteria - 12866; Metazoa - 42714; Fungi - 9727; Plants - 32895; Viruses - 425; Other Eukaryotes - 16974 (source: NCBI BLink).
Link
InterPro Scan - TAIR