1. Home
  2. Mutant Lines
  3. 53-3924-1

53-3924-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24050864 [Map]; Strand: c
      • AT5G59690.1 - [+] show detail - Histone superfamily protein
        Distance: -688; Region: promoter
    Flanking Genome Sequence: 53-3924-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATTACA ATTGTGTCAC AAGTAAATTC GTTGAGTGGT 
    GGTTTCATTA CAATTGTGTC ACTTGCAGCA CAAACTATCT TGCTCTGGGA 
    ATCATCTCAG CATCAAAGAT CATGCTCACT TCAGGGGAAC TTAGTGTATC 
    CATGCCTCGA CTCATATTTC TCCTCGAGTT TTCAGACACG AGACACTCTT 
    TTAGTTCAAT AACAACATGA GACATGGTTG GTCGTCTTGC TGAGGTAGGA 
    TC

AT5G59690.1

Model type
Protein coding
Short Description
Histone superfamily protein
Computational Description
Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: thylakoid; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR