1. Home
  2. Mutant Lines
  3. 53-3936-1

53-3936-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22596242 [Map]; Strand: c
      • AT5G55830.1 - [+] show detail - Concanavalin A-like lectin protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3936-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGNT ACGGGATTTT 
    CCCATCCTAC TTTCANTNCT GNTTGNNACA GGGNTCAATA TCATTGCCNA 
    NNAGANAATN NCATAGGGNN AANNNTCCCA GGGCCTGCCG ACGAANCNTA 
    NCGNCNANGC ATTATGTTGC TCGTCTTAAT ATCTCTGTGA ACCACTTGCT 
    NGCTCACACT CATGGTGAAG ATAAGACAAA GCTGATGCTA AACCAATCGC 
    TATATTCAGC CTATGAGACC AGTCAAGCGC CACAGCTCCT GTTTGTGATT 
    CTTGATACAG AATCTTATCA AGACTTCCAT TAGGCATGAA CTCATAGACA 
    AGAAGCAATT CACCTTTCTC GTTACACCAA CCCTGCAACT GAACAAGATT 
    CTTGTGCCGC AAGCAAGCAA TAATCGATAA CTCTGCCAAA AACTCTGTTT 
    TACCTTCGGT TGAATTATGC CTCGATCTTT TCACAGCAGA GATCGTCCCA 
    GAGGAAACAA ACATAGCTCT GTAAACATTC CCAAACGCTC CTCTTCCAAT 
    GACTCTACTT GAATGAAACC CTTTAGTAGC TGTGTAAAGC TCTTTATAGC 
    TAAACTCTCT TAAACCAGTG ATTAGCTCAG TCTTAAGCTC CTTCTCTGCT 
    TTCACACTTT TCCATTTCTT CAAAGTAAAG TACCCAAACA CAAAGAGAGC 
    TAAACAGATT AACACCGGAC AAGAAATACC AAGTCCAATA GCAAGATTGT 
    GTCGATGCCT CCGCTTCTTA CTCGGTATCA CAACANGATC AT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22596279 [Map]; Strand: c
      • AT5G55830.1 - [+] show detail - Concanavalin A-like lectin protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3936-1 - 3-prime edge 
    GTCTCAACTT TAACCGCTGG TACAATGGGT TACCTCGCAC CAGAGTATCT 
    CCAATACGGC ACAGCGACTG AGAAAACAGA TGCTTTTAGC TACGGAGTGG 
    TGATCCTAGA AGTTGCTTGT GGGAGAAGGC CAATAGATAA AGAACCAGAG 
    AGTCAAAAGA CAGTGAATCT AGTGGATTGG GTTTGGAGAT TGCACAGTGA 
    AGGAAGAGTT CTTGAAGCTG TGGATGAGAG ATTGAAAGGT GAGTTTGATG 
    AAGAAATGAT GAAGAAACTT TTGCTTGTGG GTCTTAAATG TGCCCATCCA 
    GATAGTAATG AGAGACCATC TATGAGACGT GTTCTTCAGA TACTTAACAA 
    TGAGATTGAG CCAAGTCCGG TTCCGAAGAT GAAACCTACA TTGTCTTTCT 
    CTTGTGGGTT AAGTCTTGAT GACATTGTTT CGGAAGATGA AGAAGGAGAC 
    AGCATCGTGT ACGTTGTATC TTAGTATAAC ACTTTTAATT CTTTCGTTTT 
    GATTGATATT TTTTCATTTG ATTTTGTATA AACACTATGT GTGGCCTTTG 
    GTTCAATGAG TTTATATTGA ACCATTAGGT TTCTGTTTTC ATATAAATCT 
    ATCTCAGAAT CTTGAACAAA AGCTCATTTT CTAAATAGGG AATGATTTAT 
    AGAGAAATCA AAAGCCAAAA CCCATTTCAA GATTGATCAA AGTTACGTAC 
    CTTACTTGAT AGTGAAGAAA CCTTGTGACN

AT5G55830.1

Model type
Protein coding
Short Description
Concanavalin A-like lectin protein kinase family protein
Computational Description
Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR