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53-3939-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18271221 [Map]; Strand: c
      • AT4G39240.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: -434; Region: promoter
    Flanking Genome Sequence: 53-3939-1 - 3-prime edge 
    NAANNNNNAT AAAANAAAAA AAAAAANAAA AAAANNNNAN NNNNNAANNN 
    NGAATTTTGT ATNCGGCAGT AGTATTTTAN CGACCGTTAC CGACCGTNNN 
    CATCCCNTCA CAAATAACCT TAATACAGAG TCATNNAGNN AAAACNGGAG 
    AATCGAAAGA TATGGANTCC TCAAAGAATA TGGGAGAAAC ATTGGAAGTA 
    GGAATNTANA TATAAACAAT AATTCGCAAC TGACAGGGTT ACGANAAAAA 
    TCGACCGGTG AATCCTCTNT NACTCTCGAT GGTTTTGATT NACTGCANCC 
    TNATGTTTCT CATCCTGCAT AAACAAATTA TTAATCANAN AGGAGTCTNA 
    AGGCTNGGAT NGNTNAGCAT TCTTAATNAT AGCACNAATG NGTCTTTTTT 
    AGGACAATAC ATTACCCNNT TCTTNCTCCT GACTAAGCTC TGCCATCAGA 
    GCANAACTCN ACTAGNCCTG NAGCACNGGG AATGGAACAG CGACCAGNGN 
    CTNTANGCNG NNGATGTCTT GCACNTAAGA AGTNCGNAGN GNCCTNNNTA 
    CCTNCNNTGN TGTNGANACC ACCCNCCACA TCAGGNAACA ANNTNGCCAA 
    NNGANNCGAG NTGCNNTGNN NCATAAGNTA GCTNGCAGCC TNGCTNAATN 
    GCTTNGNTNN NTGNTCTANC ANNNNCACAN ANCCNAAANC TNNNNANAAG 
    GANATNGNCG CCTNGNNNNN ATAGGNNGTA GGGNAGANGA CGAGCNNNAC 
    NNGGATTANN ACNGNANANT NNNCAAANTA TNANNGNANN TNNNGAATNT 
    AANAGNGAAG AAATNTGNGC CTTGNNNGNT GGTAGNNCAC CGNGCNATNG 
    NNAANAGTAN NGNNTCAANA NGNANCANAN G

AT4G39240.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT4G14905.2); Has 1894 Blast hits to 1751 proteins in 120 species: Archae - 10; Bacteria - 133; Metazoa - 685; Fungi - 4; Plants - 1024; Viruses - 7; Other Eukaryotes - 31 (source: NCBI BLink).
Link
InterPro Scan - TAIR