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53-3968-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1231167 [Map]; Strand: c
      • AT3G04570.1 - [+] show detail - AT-hook motif nuclear-localized protein 19
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-3968-1 - 5-prime edge 
    CCACCATGGA TTCGCCATGA AAGCCCTAGA GAGGTTAATT AATTCTGATT 
    AAATGTTTCA AGAAGTGAAA CCCTAAGAAA TATAAGTTAA TTTAGATCAG 
    GAAAAGGAAG AAAAAAAACN TGAAAAACCT AGAAGCNGGT GATAAGATTT 
    TTCAGATCTT GATTTTTTAA CACTTTTACA AGTTTTTGTG TTGTGAGAAA 
    CACAAGACAA ATTGCAAAAG GTTAATTAAA AGAACACGAC AAAGAATGAT 
    ACTAAGCAAG AAAGAGAAAA GATGTAATGG AAGCTAACTT ATAAAAATAA 
    GTGGAAGCAT ATGTATATGT GATACACATA CATGTATACG TATAGTGTTT 
    ATAAGAAATA AAAATTAAAA ACAAATCCCT CAACTCAAGG CTTGAGAGAG 
    TGACATAATT ATATTTAAGA CAGAAAAAAA GTCGTATTAC AAATAGGATA 
    CAATATGCAT CGTACGTTTT CTTGGGAAAA TTTTGATGAC ATATTGTTTT 
    GCAGTTTTAT TGTCATTTGA CAGAAAAATT TGTTAAAAAT TGGCTTTAAA 
    TATTAATTGG TTAAGATAAT TTTTTAAAAA CCTGTCATTT TGTATTTTGT 
    CTTTTTTAAG TTAGCGTTAT AATTGATGTG TAGGGTCGAG CGCCGAGGTT 
    GAACTAATGG GGCGCACGAT CGTTTTCCCA TTTCAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1231242 [Map]; Strand: c
      • AT3G04570.1 - [+] show detail - AT-hook motif nuclear-localized protein 19
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3968-1 - 3-prime edge 
    GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCAGGA 
    CAGGACAAGT GAACCTATCC GGCCTCGAAA CGACGCCGCC TGGTTCCTCT 
    CAGTTAAAGA AACCAGATCT CCACATCTCC ATGAACATGG CCATGGACTC 
    AGGTCACAAT AATCATCACC ATCACCAAGA AGTCGATAAC AACAACAACG 
    ACGACGATAG AGACAACTTG AGTGGAGACG ACCACGAGCC ACGTGAAGGA 
    GCCGTAGAAG CCCCCACGCG CCGTCCACNG TGGACGTCCT GCTGGTTCCA 
    AGAACAAACC AAAGCCACCG ATCTTCGTCA CTCGCGATTC TCCAAATGCT 
    CTCAAGAGCC ATGTCATGGA GATCGCTAGT GGGACTGACG TCATCGAAAC 
    CCTAGCTACT TTTGCTAGGC GGCGTCAACG TGGCATCTGC ATCTTGAGCG 
    GAAATGGCAC AGTGGCTAAC GTCACCCTCC GTCAACCCTC GACCGCTGCC 
    GTTGCGGCGG CTCCTGGTGG TGCGGCTATT TTGGCTTTAC AAGGGAGGTT 
    TGAGATTCTT TCTTTAACCG GTTCTTTCTT GCCAGGACCG GCTCCACCTG 
    GTTCCACCGG TTTAACGATT TACTTAGCCG GTGGTCAAGG TCAGGTTGTT 
    GGAGGAAGCG TGGTGGGGCC ATTGATGGCA GCTGGTCCGG TGATGCTGAT 
    CGCCGCCACG TTCTCTAACG CGACTTACGA GAGATTGCCA TTGGAGGAN

AT3G04570.1

Model type
Protein coding
Short Description
AT-hook motif nuclear-localized protein 19
Computational Description
AT-hook motif nuclear-localized protein 19 (AHL19); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 20 (TAIR:AT4G14465.1); Has 7030 Blast hits to 3903 proteins in 396 species: Archae - 17; Bacteria - 3505; Metazoa - 1173; Fungi - 108; Plants - 1514; Viruses - 84; Other Eukaryotes - 629 (source: NCBI BLink).
Link
InterPro Scan - TAIR