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Mutant Lines
53-3971-1

53-3971-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 22277580 [Map]; Strand: c
- AT5G54840.1 - [+] show detail - Ras-related small GTP-binding family protein
  Distance: 0; Region: exon3 (CDS)
- AT5G54840.2 - [+] show detail - Ras-related small GTP-binding family protein
  Distance: 0; Region: exon3 (CDS)

GTTGTAGGTG ATGAAAAGAG ATCAAAAGAT CATATACCAA TTGCTTGTAA 
AGATGCAGTA GCAATCTTGT TCATGTTTGA TCTAACCAGT CGATCTACTC 
TTAACAGGTT TTTTTTTTTA AAAATTTNTT NNTNAANCNN CCNGTTTTTT 
TTTTNTNNCC GGAANNAANT TTNTTTTTAA AAAAGGNAAA ANTTTNNTTT 
NNTTTNNNTT GNCNGGGNNT NGGGGGGGTT NNCCCGGNCA AAAAANGGNA 
CNNGGGNCCN TTAANNTTTT TNNTTTNGGG CANNCAANNA NAAAAAAAAC 
CCCNNCNNCC TTTTTTGGGG NANAAAANNN NGGNC

3 prime edge [+] show sequence

Chromosome: 5; Position: 22277696 [Map]; Strand: c
- AT5G54840.1 - [+] show detail - Ras-related small GTP-binding family protein
  Distance: 0; Region: intron2 (CDS)
- AT5G54840.2 - [+] show detail - Ras-related small GTP-binding family protein
  Distance: 0; Region: intron2 (CDS)

CCTACAACAA TCATTTTTCA ATCTCCTAAT TAATAAATTA CAAAGACAAA 
GTACGTACTG TAATTGCCAA TACACTAATC ATCATATGAT TAATTAATAT 
TTTTAATTTG ACTCACCTCC CACATCCCAA ATGCTAAACG AAATAGTAAC 
TCCTTGAACA TAAAAAGTTT TGTCCATCAA ATTCAAACCC GTCATCTCCA 
AGAAACTTTG ATTCTCATCT CCAACATATT TTACCTTCAA ATAAAATAAA 
ATAAACATAT GAGGATTAGT CAGTTAATTA AGGTACATAA CAAGACAGTA 
ATTAATACTT AGCACAAGAA TCCATACTTA CTACAAAAGT AGTCTTCCCT 
GTTTGACAAT CGCCTAATAA ACTGATCTTG AGACTAACCA AATCCGAATC 
CGAACTTGAA CCAAACCTTC TACCGGAAAC AGTAGGTTCT GTCGTAGTAT 
CGTCGTCTCC GTCAAAGATA TCGCCCGCGG TGGAAGAAAT CTTGTGAACG 
ATTCGCCGGT AAAGAATAGG TTTTTCGATG ATACTTGAAC AAGAAACAAT 
TTTTCTCCAT AGAAACCTAA AGAAATCTCC AAAGATCGAT ACCCTCTCGA 
TGATTCTCCA TTTTCTGTTC ACGTGAACTA TTTTTCCGGC AGAAAGGAGT 
TATCTTTCCG GCGATCTCAT GGACTTTCTC GGCCATTGAT GAAACAGAGA 
GAAAGTTATG TGATCTTTTG GCATTCACA

AT5G54840.1

Model type: Protein coding
Short Description: Ras-related small GTP-binding family protein
Curator Summary: Monomeric G protein. Expressed in the root quiescent center, flowers, and leaf guard cells and hydathodes.
Computational Description: SGP1; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Mitochondrial Rho-like (InterPro:IPR013684), GTPase, Tem1 (InterPro:IPR017231); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT3G21700.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G54840.2

Model type: Protein coding
Short Description: Ras-related small GTP-binding family protein
Curator Summary: Monomeric G protein. Expressed in the root quiescent center, flowers, and leaf guard cells and hydathodes.
Computational Description: SGP1; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTPase (InterPro:IPR020851), Mitochondrial Rho-like (InterPro:IPR013684), GTPase, Tem1 (InterPro:IPR017231); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT3G21700.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR