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53-3985-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24213306 [Map]; Strand: w
      • AT5G60130.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -348; Region: promoter
      • AT5G60130.2 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -142; Region: promoter
    Flanking Genome Sequence: 53-3985-1 - 5-prime edge 
    AAAAGCAGAG ACTTGAACGC TTATTGTCTC AAATGGAAAA AAAAAACTTT 
    ACTAACTACA TTTACTTNAA NGTAAAGCTG AAATTNGGAA CCCTAATTTT 
    AANATGAGTN CAGTTNTTCA AACCCCAAAT TTCTNAAATA GTNCGGTTTC 
    CGTNGAGNGG CTTTCNACTT TNGTAGCAAA AACTTGAAAA CANAGGTTTC 
    TCTCTGTTTC TATNCTNGTG GCTTCAAANG GTAAAACCGT AAAANACTAC 
    TTAAAACNAC TTCGTTTTAA AANAAAATTC GNGAAANANC CAAGGCCCGC 
    NAAANCCAAN GGACCTAAAT TNTTTNGGTC CCNTTCNAAA TGGGGTTTTN 
    TAGTAGTCAG NGGAAGGCCT AGNGATTTCC TCCAAATNTN TTTGCAACAT 
    ATNGTTGGGT TCTNTTTNTT ATTTNGATTN GNAAGTTNGT NTNCAAAAGN 
    GGNGCCAACA NCAAAACACA ANCCCAANCC CATTNGNCAT TTNACTATAA 
    NGTCTTTNGA NATTACTCCA ACACAAAGGA CNACCTTTGT CCNAACAATG 
    TAAGTACTAT TTGTNTGAAT CCGTTGGAGG ACGTTGCCCT ACTTACTGCA 
    GGCAACAAAG CAACAAGATT TGTCTANACG GCATACCTCA AGAGTTTGTT 
    GCAAGANAAA CCAGAGAGAT TTAATGAGAC ATGANCTNTN TTTANAAAGT 
    CTTAATTCN

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24213190 [Map]; Strand: w
      • AT5G60130.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -232; Region: promoter
      • AT5G60130.2 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -26; Region: promoter
    Flanking Genome Sequence: 53-3985-1 - 3-prime edge 
    CTGCTTTTAG CTACAAAAGG AAAAAAACAC TAAATCAAAC AATAAGATCG 
    GAGAACGCAT ATTAACCTTC AGTTAAATCA AACAATTAGG GTTTCACAGA 
    GATCTAGACA AAGAGCAGAC AGAAGTGAAG ATGAACAAAG GTTTCTTCTT 
    TTTTGTTCTT GATTCTACAT TTACACAATG TATCCTCTGT TTTGATCTTT 
    TCTTGCTATC GAACAGGAGT TTCTTTGGAT AATTGTGTTC CAAAATTCTT 
    CAAAGTTTAC TTACCTGATG AGTCCGGAGA TGATATGGTA AAACACTCTT 
    CTCTTCTCTC TGTTTTTTTT GTGGGTTTTT CTGAGATGTT CTTCTGTAGA 
    TTTCTATTTG GTTGAAACTT TTAGATTGTA TAATGCAGGT ACTACCCATT 
    TCTTTCACCA GATTTTTACC AAAGTCTTTG CCTGAAACTG TAACTGTTAG 
    AAGCATTTCT GGAAATATTT GGAAATTGGA GTTAAAGAAA TGTTGTGGTG 
    ATGATGATAC TGAGAAATTC GTTATGGTTA ATGGGTGGAA GAGGATTGTG 
    AAGGACGAAG ATCTCAAGGG AGGAGATTTC TTAGAGTTTG AGTTTGATGG 
    CTCTAGTTGT TTCCATTTCT GTATCTATGA GCATAGGACA ATGTGTAAAA 
    AGATAAGAAN AAGTTCAGAT CAAAGCGAGG AGATCAAAGT GGAATCTGAT 
    AGTGATGAAC AAAATCAGGC CAGTGAN

AT5G60130.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60130.2

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60140.1).
Link
InterPro Scan - TAIR