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53-3992-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17598924 [Map]; Strand: c
      • AT1G47786.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 53-3992-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA ATATATATAT AAGGTCTAAA ATATGTATAT 
    TAATTTAAAG TATAGAAAAT TATAAGTTAC TATTTGGGGA AGCATGATCA 
    GAAAAAAGGT TAGCAATAGA TAAAGCTGCA TGATGTAATG ACACCTCATC 
    ATCTTGCATG TTTTCAGAAA TTTCTGCAAT ATCGAACCCT GATTCATCAA 
    AGAAGAGTGT AGATACAATA TTATTAATAA TATATTAGAA ACATTAAATG 
    AAATTTGAAA TCAACTGATC TTACATGCAT TGGTTTCCAT TCCACCTAAG 
    ATAGTAACGG GGCGTCTAGG AGCAGTTGGA CAAATCCACT TAATCTACAC 
    AAAGTCATAT ATATACTTTA TTAGAAACTT GACGAAATTT CTATTAGGAT 
    ATAAGAATCG TGAAAACTTG ATCCATACAT TTCGAAGACC CAACTGTCTC 
    GCAAATCGAA CCGAATTGCA GACATAATAG ACCGATATAT ATATATAGTG 
    AGAAAAACTT CGAATACAAN GGAGAACAAA ATTCAAGTAT ATACTCCTTC 
    TGTTCTTTAT TATNNGATTT TCTAGAAAAA ATTATTTTTA AAAGATTGAT 
    TTTNTAAATT TTCTATGTAA TATTAATTAA TTGNTATTGA TGAATATCAA 
    ATNTCAAAAT AAATAGTTAA ATATCATTGG TTTAGAATTA TAAAAANTGT 
    ANATCACAAA AAAAACAAAC AT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17599002 [Map]; Strand: c
      • AT1G47786.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 53-3992-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAG 
    CGCAAGCTCT CTTAAGAGTT GCTATGACAC TAATCAACGG CTTCAAATAA 
    AGCCACGAGT TGTTATAGGG CTTAAAGGAT GGCTTCCTGG CTGGAGGTAG 
    AGTCTTCAAG TCCTACTGTC ACTCACTTTG TACTAATGTT TAGACTCACA 
    TTTTAAACAT TGGAAACCTA CAATCTTGTA GAAGCTTACA AAACAATATA 
    GCATCTAACC CCTGGGCTCC AAATCGTCCT CAACCTCAAT CAACACCAAT 
    CTTCAGCACA TTCACCTAAC CACGGTAATC CCCCCTGACT CTACTCATGA 
    CCTTGATTCT TTTGTTTGGA AGGTTGGAAG TGAAGAGTTT CGTAGCTTCA 
    GCACATCAAA AACATGGGAT TCTTTAAGAC AAAGGAGTGC CCTCATGCCG 
    TGGACAGAGC ATGTTTGGTT TAAGGGAGCA ATACCGCGTC ATGCGTTTTT 
    GTCATGGCTT ACGCATCTAG ACCGTTTACC CACTCGACNA NGTNTATNCC 
    GTNTNCTNCN CGGCCGGGGG NNNNNTNTNN CNNANNNAGT NC

AT1G47786.1

Model type
Protein coding
Short Description
alpha/beta-Hydrolases superfamily protein
Computational Description
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G47780.1); Has 1065 Blast hits to 1060 proteins in 341 species: Archae - 0; Bacteria - 365; Metazoa - 320; Fungi - 98; Plants - 152; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink).
Link
InterPro Scan - TAIR