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Mutant Lines
53-4007-1

53-4007-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 6775311 [Map]; Strand: w
  - AT1G19570.1 - [+] show detail - dehydroascorbate reductase
    Distance: -783; Region: promoter
  - AT1G19570.2 - [+] show detail - dehydroascorbate reductase
    Distance: -783; Region: promoter
  - AT1G19580.2 - [+] show detail - gamma carbonic anhydrase 1
    Distance: 0; Region: exon2 (CDS)
  - AT1G19580.1 - [+] show detail - gamma carbonic anhydrase 1
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 53-4007-1 - 5-prime edge
```
GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCT TAGGCATCGG ACACTGATGA ATGTATTTGA 
TAAGGCTCCG ATTGTGGACA AGGAAGCTTT TGTGGCACCA AGCGCCTCAG 
TTATTGGGGA CAGTTCACAT TGGAAGAGGA TCGTCCATTT GGTATGGATG 
CNGTATTACG AGGTGAGCTA GCTACTAAGC CTCAATGTTT GGTGTTTGGT 
GGTTGACTAT TTTAGTGACT GAAGTTTTGT TTGAAATAGT ATCTACTTCT 
GTATCCTTAG CTGTGTCAAC TCTTACGATA GAAAATAGTG A
```
3 prime edge [+] show sequence
1. Chromosome: 1; Position: 6775274 [Map]; Strand: w
  - AT1G19570.1 - [+] show detail - dehydroascorbate reductase
    Distance: -746; Region: promoter
  - AT1G19570.2 - [+] show detail - dehydroascorbate reductase
    Distance: -746; Region: promoter
  - AT1G19580.2 - [+] show detail - gamma carbonic anhydrase 1
    Distance: 0; Region: intron1 (CDS)
  - AT1G19580.1 - [+] show detail - gamma carbonic anhydrase 1
    Distance: 0; Region: intron1 (CDS)
Flanking Genome Sequence: 53-4007-1 - 3-prime edge
```
ATTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTACATATA 
AGCAAATTTC GTGACCAGGA AACAAAAAAA AAACTAAGCA GCAAAACNCA 
TTCCACATNA ATTAATCCCT NGNGCCATTC NAATCCANAA TCGNTNTACC 
TACAAAGACN TNAATTCCAN ATNTTTAACC TAACCAGAAT AGGNGAGCTG 
AATTACCCAA TCNAAACTCC TNACTNTTTA CNAATT
```

AT1G19570.1

Model type: Protein coding
Short Description: dehydroascorbate reductase
Curator Summary: Encodes a member of the dehydroascorbate reductase gene family. Critical for a mutualistic symbiosis between the host Arabidopsis and the root colonizing fungus Piriformospora indica.
Computational Description: dehydroascorbate reductase (DHAR1); FUNCTIONS IN: copper ion binding, glutathione dehydrogenase (ascorbate) activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: dehydroascorbate reductase 2 (TAIR:AT1G75270.1); Has 5234 Blast hits to 5161 proteins in 1116 species: Archae - 0; Bacteria - 2090; Metazoa - 1076; Fungi - 186; Plants - 896; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G19570.2

Model type: Protein coding
Short Description: dehydroascorbate reductase
Curator Summary: Encodes a member of the dehydroascorbate reductase gene family. Critical for a mutualistic symbiosis between the host Arabidopsis and the root colonizing fungus Piriformospora indica.
Computational Description: dehydroascorbate reductase (DHAR1); FUNCTIONS IN: glutathione dehydrogenase (ascorbate) activity; INVOLVED IN: in 6 processes; LOCATED IN: mitochondrion, apoplast, peroxisome, chloroplast, plasma membrane; EXPRESSED IN: phloem, guard cell, cultured cell, seed, leaf; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: dehydroascorbate reductase 2 (TAIR:AT1G75270.1); Has 4831 Blast hits to 4829 proteins in 1069 species: Archae - 0; Bacteria - 2139; Metazoa - 988; Fungi - 182; Plants - 765; Viruses - 0; Other Eukaryotes - 757 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G19580.1

Model type: Protein coding
Short Description: gamma carbonic anhydrase 1
Curator Summary: Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.
Computational Description: gamma carbonic anhydrase 1 (GAMMA CA1); FUNCTIONS IN: carbonate dehydratase activity; INVOLVED IN: photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 2 (TAIR:AT1G47260.1); Has 10894 Blast hits to 10839 proteins in 2210 species: Archae - 265; Bacteria - 7962; Metazoa - 13; Fungi - 83; Plants - 197; Viruses - 0; Other Eukaryotes - 2374 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G19580.2

Model type: Protein coding
Short Description: gamma carbonic anhydrase 1
Curator Summary: Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.
Computational Description: gamma carbonic anhydrase 1 (GAMMA CA1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 3 (TAIR:AT5G66510.1).
Link: InterPro Scan - TAIR