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Mutant Lines
53-4034-1

53-4034-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 17808465 [Map]; Strand: c
- AT4G37870.1 - [+] show detail - phosphoenolpyruvate carboxykinase 1
  Distance: -1926; Region: intergenic
- AT4G37880.1 - [+] show detail - LisH/CRA/RING-U-box domains-containing protein
  Distance: -1216; Region: intergenic

GAGAAGAGTG AATCGGCCTC CCCCACAAGG TGACAAAACT GGAATCTATA 
ATGGGAATGT AAATAATCAA TAAGAGAAAG AACCAATGAA CATTCAAAAG 
TGAAAGAAAT TGAGAGTAGA TACATATAAT AGTACTAATT AACCACTCCC 
TTGCACATGG TTAATCTACA GAGTTGGATT CCATTATCAA GTAGTACCTA 
TGTCAAGATT CGAGAAGATC TTCAATGAAC AACTATTCAA CTCTCTTTTT 
TGTAGGCCTA CTCGTTATTT AACTATATGA CTAATGGTGT TGTCTAAAAT 
GGTTTACCGT ATGGTCTGAA TATAAAAATG GTTGAAACGA TGATAGATTA 
GAATTTATAA ATGCAAATTA ATTCATCTTT TTTGGAACGT GGGTCATTGA 
TGTGAACATC TAATCGGTCA CGGCCGAGAC CGACAACCAA AAAAATTGTC 
ATGAAATTTT CACGGGAGTC TCTCGCGTGA GTCGTGATCT CTCTCCATCG 
CGATAATATA TGTGCCAACG GAAGACTTTT TTTCTTATAA CAAAAAGACT 
CTTATTCCTA AAAAGCTACA ATTCAGCGAA AGACTTTAAG TTTGCTTAAC 
CTTTTCTATA TTCTTTTTGA ATTTTCAAAA CTCATAAAAC CAATAGTAAT 
TAAAGTCCAT CGGCCGATTG GGTCCAGACT ATTAAAGTTG GATCGGATTA 
ATTTTN

3 prime edge [+] show sequence

Chromosome: 4; Position: 17808581 [Map]; Strand: c
- AT4G37870.1 - [+] show detail - phosphoenolpyruvate carboxykinase 1
  Distance: -2042; Region: intergenic
- AT4G37880.1 - [+] show detail - LisH/CRA/RING-U-box domains-containing protein
  Distance: -1100; Region: intergenic

CTCTTCTCCT CTTCCCTTTT CTTGGATATC TCAATTCACA GTCCGCAAAA 
AGAGTTTCTA CTGATGTCAT AATTTAAACG CGTTATTTTC TCCTATATAT 
TCGTTTTGGT GGGTTTCTCG TATTTTAACA ACTATTGAAA CAAATAAAAT 
GAATCACACN GAAAAAACAC ACTATAGAGT CTATATCTTC GATAACATAT 
AACATACATG ATTTGATGAA AGCAAACTGA GAAAACGTTT TTTTTTTTTT 
TTTTTNNNNN GGGGNAAAAA AAANGNTTTT TTTTTTTTTT NAAAAAANTT 
TNNNNNNNTT AAANNTTTTT TTTNAANNNN NGNNAAANTT TTTTTNGGGG 
GGGGNNANTT NNANTTTTTN AAAAANNTNN GGGGGTTTTN ANCCCCNANN 
TTTTTTTTTN AANGGGGGNT NAAAAAAAAA AAAAANTNGG GGNNNNNGGG 
GNTTTTTTNN NCCCCCNTTA AGGGGGNNAA ANCCCNTTTT TNNNNNAAAA 
ANAAAANTTC CCCCCNTTNN GNTTTNAAAA TTNGGGNNNG GGGNTNCCNN 
NNNNNGGGGN TTTTTNGNNG GGGGNNGTTT TNAAAAANAA ANNGGNTTTT 
TTGGGNANNA AAANNGGGGG GGTTTTTTNN ANGGGGAAAA AAAAAATTTT 
NNNNTTTTTT TNNNNNGAGG GGNAANTTTT NTTTNTNNNN GGGGNGGNGG 
GAAANATTNN TTTTNTTTTT TTTAAAA

AT4G37870.1

Model type: Protein coding
Short Description: phosphoenolpyruvate carboxykinase 1
Curator Summary: Encodes a putative phosphoenolpyruvate carboxykinase (ATP-dependent).
Computational Description: phosphoenolpyruvate carboxykinase 1 (PCK1); FUNCTIONS IN: phosphoenolpyruvate carboxykinase activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, ATP binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cadmium ion, cellular response to phosphate starvation, gluconeogenesis; LOCATED IN: cytosol, nucleolus, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoenolpyruvate carboxykinase, N-terminal (InterPro:IPR008210), Phosphoenolpyruvate carboxykinase (ATP), conserved site (InterPro:IPR015994), Phosphoenolpyruvate carboxykinase, ATP-utilising (InterPro:IPR001272), Phosphoenolpyruvate carboxykinase, C-terminal (InterPro:IPR013035); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxykinase 2 (TAIR:AT5G65690.1); Has 4504 Blast hits to 4501 proteins in 1411 species: Archae - 21; Bacteria - 2559; Metazoa - 2; Fungi - 139; Plants - 194; Viruses - 0; Other Eukaryotes - 1589 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G37880.1

Model type: Protein coding
Short Description: LisH/CRA/RING-U-box domains-containing protein
Computational Description: LisH/CRA/RING-U-box domains-containing protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein, CRA domain (InterPro:IPR019589), Zinc finger, RING-type (InterPro:IPR001841), CTLH, C-terminal LisH motif (InterPro:IPR006595), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT2G22690.2); Has 833 Blast hits to 829 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 364; Fungi - 234; Plants - 138; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink).
Link: InterPro Scan - TAIR