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53-4035-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24099549 [Map]; Strand: w
      • AT5G59810.1 - [+] show detail - Subtilase family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 53-4035-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCG TCAATTTGGG TGAAACTAAT AATACTTTTT 
    AAACCTAGAT TTTAGTCCCT CGCTTAAACC CGGGAAAAAA ACAATGTCCC 
    GCAAAATTTC CACGAACAGC CTCGTACGTA CCAAATGAAA TCCTAATTTT 
    TTTGTTTCGG TTTGAAATTC AACATTAAAA ATGATTATTC TAATTTTTCT 
    TTTTACTTAC CTCTAATTGA GTTTGGTTCA AGTTGTGTTT TACTAAACAC 
    AGATTACTTT TTTGTTCAAA TACATTTAAC AAAGATTTTC TTACAAAAAA 
    CATCAATGTC ATATTAGAGA TCCAGCGATT TGAAATATTT CCGCAAAAAA 
    TTCAATGTTA TTAACCTAAT ATGTCATATT AGATGATCCA GCAATTCAAA 
    ATACTTCCGC AAAATATTCA ATGTCATTAA CCTAATATGT CATATTAGAT 
    ATTGATCCGG TGATTAGAAA TACTTCCCGG TTTGCTATTT GATCAAATCT 
    TTAAAACATT GGTTTGGCAT AAATAGGAGT AATGGTACCT TCCAACGAAA 
    GAGGCGAGAA AAGTGCGATG TGAGTGAGCA ACACCATCGA GATGGGCAGA 
    AGAGATTTGA GGAAGATGGG CGTGAGATCC CAAGTACACT ATGTAGGACT 
    GTAACACAGT AGGAAACAAA TTAATGCATA TCGATCTTAC GAGCAATGTA 
    TATAGAAAGT GAGTTACATA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24156840 [Map]; Strand: c
      • AT5G59990.2 - [+] show detail - CCT motif family protein
        Distance: -3756; Region: intergenic
      • AT5G60000.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 2491; Region: intergenic
    Flanking Genome Sequence: 53-4035-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    CACTACAGAG TACATACAAA AATAAAGAAC AGGAAGTCAG GAACATACCA 
    TAACTTACTT GGTATAATTA ATGTCAACAC TGCTTTTATC ATTTTCGCTT 
    TGGATGCTAT TATATATGTA TAAATCAGTG GATGTATATG TCGAACAGGA 
    TCAATATTGG CTACATAACC GTAAGGCCAA GATTAAGAGT ACAGGATGAA 
    GAAGTAACTT TCCAAAATAG GTAAAATGGG TTAGGCTTTT GAAGTAATGA 
    TATTTCTTTT GATTTGGTGA GTCAACGGGA TGCATTTGTA TTTTTTGTAA 
    CTTTGATATA TAAAAAAAAA TGTTATTCGT TTTACCTTTG TAGGTATCAA 
    CCAAAAAAAT GAGCCTGTTT TTCACTATCA ATTT

AT5G59810.1

Model type
Protein coding
Short Description
Subtilase family protein
Computational Description
SBT5.4; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT2G04160.1); Has 6522 Blast hits to 5856 proteins in 960 species: Archae - 194; Bacteria - 3635; Metazoa - 89; Fungi - 206; Plants - 1959; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59990.2

Model type
Protein coding
Short Description
CCT motif family protein
Computational Description
CCT motif family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, stem, leaf whorl, flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT5G41380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60000.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR