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53-4102-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24471940 [Map]; Strand: w
      • AT5G60830.1 - [+] show detail - basic leucine-zipper 70
        Distance: -699; Region: promoter
    Flanking Genome Sequence: 53-4102-1 - 5-prime edge 
    CGGGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATATA CGTTGGATTC GCACATAATC GAAAGAAAAA 
    AAAAAANCAA ANCGTAAANG GGGTTTCTNG GATTTTAAGG GAANCAAANC 
    AANCAAANNG NGANGAAAAA ATAANAAAAA NTTNTTAAAA ATTNAGTGGT 
    NTNTNTCNAA NNCATNCATC CCCTTTTTTT TTTTTTTTTN GGGNCNNNCN 
    NAAAAANCCN TTTNNNNNNN TTTTNAAAAA NTNNAAANNN AAAAAANAAN 
    TTTTTTTTTT TTNNNNCCNN NNANNNAANG GGGCCCCNNN AAAAAAAAAA 
    AAANTTTNNA AANGGGNNCN NAAATTTTNN NNNNNAAAAA AAANCCNNGN 
    CCNAAAAAAN GGGNNNNNGG GNAAAAAAAA NNGGNCCCCC CCCCCNNAAA 
    NNNNAAAAAN GGGNNNTTTT NNNAAAAANN NNCCCCNAAN TTTTTNNTTG 
    GGGGGNNNTT TTTTTNNNCN NNNAAAAANG GGAAANCCNT TTNNNNNNCC 
    CCNAAAAAAN TNGGGGGNNT TTTTNNCCCN NNNAANCCCC TNNGGNGGNC 
    CCCCCCCNAN TTTTTTNNTN TTTTNCNAAN TTNNNNNTCC CCCNANTTNT 
    TTNGGGGNNN NGTNNAANCC CCCCCCAAAN NCCCCCCCCC CNGGGTTTTT 
    TTTTTTGNNN NTTTTTTTTN CCCCCCNNAA AAAAAANTAC CCCCNGGGGG 
    NGGNNCCGNG NNNTTTTTTT TAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24464871 [Map]; Strand: w
      • AT5G60800.1 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: -2335; Region: intergenic
      • AT5G60805.1 - [+] show detail - Putative membrane lipoprotein
        Distance: 189; Region: intergenic
    Flanking Genome Sequence: 53-4102-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTTATGAACT TCACCATGCT ACTTTTTCAT CGATCAATAA GTTACGAAAT 
    TACGATTGAT TTAGACATAT CATATCCAAA ATCATGTAGA TTTACCAGGA 
    GAAAACTACA CACATCTTCC AAAAATTGAG ATACTNGAAA TTTATACAGA 
    TAAAAATGTT TCACTTTGAT TTAATGAAAA CATAAAAATA TGCATTGAAC 
    TATTTCGTTG ACACTTTCTC AATTATATGA TTTTGGTCGA ACAAGTTTTT 
    TTTTTAAATG ACATAAAGTT TCCATATATT ATTATTTATT ACATCATCAG 
    TTTATANACT TTGAAGCGTC GTCATAAACA TGCTAATCAN AATTTATCTA 
    TACCTCCACA AGCGGTAAAT AGNGAANATC TTGTAGCAAG CNCTATATGC 
    TATAGTACTC GGTTCTCAAT CCATGTTTTT TTCATAAATA GAAACTANAC 
    GTATATNGTN GNCAANGGAT TAATTCTAGT TNGAATCATA TTTATTCTTA 
    GGAACCGAAA GACATTGAAN CATGTAATGN GAATGGAGAG GCAAATGAAA 
    AGAATGGTTT GGGGTAGATA GTAAAGAAAT GGNGATGAAA AGAAACANCA 
    NGAGGAGACT CATCAAAACG GNGAGTTTAA CGGCTGATTA CAGCAACCCT 
    GGTATCATAT AAAATTTTTG TTACATGAAA GACGAGCCTC ACTTGAAATG 
    AGTCACTTTC ACAAAGGGGC TTCGGT

AT5G60800.1

Model type
Protein coding
Short Description
Heavy metal transport/detoxification superfamily protein
Computational Description
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60805.1

Model type
Protein coding
Short Description
Putative membrane lipoprotein
Curator Summary
Encodes a defensin-like (DEFL) family protein.
Computational Description
Putative membrane lipoprotein; LOCATED IN: endomembrane system; Has 9 Blast hits to 9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60830.1

Model type
Protein coding
Short Description
basic leucine-zipper 70
Computational Description
basic leucine-zipper 70 (bZIP70); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 75 (TAIR:AT5G08141.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR