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Mutant Lines
53-4152-1

53-4152-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 1461752 [Map]; Strand: w
- AT5G04960.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily
  Distance: -155; Region: promoter

CATATAAACA GGAAGATCGG ATCTTAAAAT AAAATAAAAC GAGAAAGATA 
CTAACATATA CACAAAGAAA CATGAGAAGC ACGTCGCAAT GTTAACAATC 
AAATTATTCA TCTTAGTGCC TCCCACGCAA AATATATATT TGTGCCGCGT 
AAAATCAAGT TTAGTCATTC ACTTTAATTA AAAATACAAA TCGTCGACTC 
TTATATATCC TCTCTACACG AGTAAACAGA TAACATCAAA AACATTTGAT 
CACACAAAAC TTCAATATCT CACAAACGAG AGGCCGGTTA GGAGGAAATT 
ACAAAAATGT CCTCCTACGG CAGACTCGAC GAGCATGAGC AAGCGAAACT 
TGAGGCAAGT CGGAAGACAA AGAAGAGAAT TGCCATCATC GCTATATCTT 
CCATCGTTCT CGTCTGCATT GTCGTCGGAG CCGTCGTTGG AACCACAGCT 
CGCGATAACA GCAAGAAACC ACCGACGGAG AATAACGGAG AGCCAATATC 
AGTCTCCGTG AAAGCCCTGT GCGACGTGAC ATTGCACAAA GAAAAATGTT 
TCGAGACCCT TGGATCGGCT CCAAACGCGA GCCGATCAAG CCCAGAGGAG 
CTTTTCAAGT ACGCCGTCAA AGTCACCATC ACGGAGCTCT CGAAGTTCTC 
GACGGATTCT CCAACGGCGA ACACATGGAT ACGCCACGTC AGCAGCAATG 
GGGGCTTGG

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 1461636 [Map]; Strand: w
  - AT5G04960.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily
    Distance: -271; Region: promoter
Flanking Genome Sequence: 53-4152-1 - 3-prime edge
```
TTTATATGCA TCATTATAAT TAAAGTTAAT AAGATTTGAT TTAATAATAG 
TAGTCATTAC TCTTTTTATA TTATTTTCTC ACTAAGCCAT TCATTCGATT 
GTAGAATT
```

AT5G04960.1

Model type: Protein coding
Short Description: Plant invertase/pectin methylesterase inhibitor superfamily
Computational Description: Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower, root; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: root hair specific 12 (TAIR:AT3G10710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR