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53-4183-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24607603 [Map]; Strand: c
      • AT5G61150.1 - [+] show detail - leo1-like family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT5G61150.2 - [+] show detail - leo1-like family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-4183-1 - 5-prime edge 
    GGGNAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATGTGA ACCCTTCGTC GGAGCTCAGA TCACGAGCCG 
    CCGTCACCAG CTAAGAGGCA GTGACTTTTG AGTAAGTGAG GCGAAGATGG 
    TTAAAGGAGA AAAGAGATCC GAGATGATGC TTAATCTGTT CGGAGATAAT 
    TCCGAGGAAG AAGAGATCGA ATCCGAACAT GAATCCAATC GTCGTCAGCC 
    TAACTACGCT TCCGTAACTC TCTCCATCTT TATCTCCTTC GTTTCGTCAC 
    TATTGATTGT TTCAGTTTTC GTATTTTTCA CTGCCACTGT TCTTCAATTA 
    CACCTTGGAA TACGAATGGT TTCTGGAGTT CTTCTCGCTT GAATTTAGGG 
    TTTTAGGTTA ATTGCAGGAA CCAATGCAAC TTATTAGGCC TAATTCAGCT 
    TCAGTTCTTC TTAATATCAA CTAGACTAAG ATATCAGTGA AATTGTGGCT 
    GAAATTTCCA ATGTAAACAC TGATAGGATG AGGCTGAGGG CGGGGTGGAG 
    CCTGAAGGAG AAGGTGAAGC TGAGGTTGAA GTTCACGGAG AAGCTGAAGC 
    TGAGTCTGAC GGGGAACAGG GAGATGTAGA ACTTGATCCT GGAGAAAGTG 
    AGGGTGAGAG GGAGCAAAGT TCACAGGAGG CTGATCCACA AGANGAAAGT 
    GAAGCAAGAG ATAGTGATAG TGATNACAAA GAAGAAGACA TNGGGGGTAG 
    AGTAGCCAAA AGANGANACA GGANGTTGTT GANAGCNGAT CAAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24607616 [Map]; Strand: c
      • AT5G61150.1 - [+] show detail - leo1-like family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT5G61150.2 - [+] show detail - leo1-like family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-4183-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    TCGGCCTTTG TTGAAGAAGC TATTTTTTTT TCATCTCTAC CTCGCGATTT 
    TATGGCATCA GAATTATTAT TATTAAAAAC AATTGTTACA ACTTACAAAG 
    AAAAGGAAAT TTTCATCGAT ATATCTTTTT TAACGCATTA CCGGATTATT 
    AAAAATCATT TTTTTTACGT GTAACGACGA CTAGAGAGGG AAAAAATATG 
    GGATTTTATG GGCTTTTTTG ANATTGGAAT T

AT5G61150.1

Model type
Protein coding
Short Description
leo1-like family protein
Curator Summary
Encodes highly hydrophilic protein involved in positively regulating FLC expression. Mutants are early flowering and show a loss of FLC expression in the absence of cold.
Computational Description
VERNALIZATION INDEPENDENCE 4 (VIP4); INVOLVED IN: negative regulation of flower development, vernalization response; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leo1-like protein (InterPro:IPR007149); Has 65962 Blast hits to 30671 proteins in 1602 species: Archae - 182; Bacteria - 8432; Metazoa - 26538; Fungi - 7901; Plants - 3149; Viruses - 848; Other Eukaryotes - 18912 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G61150.2

Model type
Protein coding
Short Description
leo1-like family protein
Curator Summary
Encodes highly hydrophilic protein involved in positively regulating FLC expression. Mutants are early flowering and show a loss of FLC expression in the absence of cold.
Computational Description
VERNALIZATION INDEPENDENCE 4 (VIP4); INVOLVED IN: negative regulation of flower development, vernalization response; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leo1-like protein (InterPro:IPR007149); Has 69096 Blast hits to 31991 proteins in 1682 species: Archae - 184; Bacteria - 8816; Metazoa - 27909; Fungi - 8257; Plants - 3470; Viruses - 882; Other Eukaryotes - 19578 (source: NCBI BLink).
Link
InterPro Scan - TAIR