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Mutant Lines
53-4192-1

53-4192-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 422645 [Map]; Strand: c
- AT5G02130.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: -613; Region: promoter
- AT5G02140.1 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: -739; Region: promoter

TATGTTATCT ATGCGTATAT AAACTTCATC ACTTGCTAGT AGCCTAGCAT 
GTCCCAACAT TTCTTACCTT TGCTATGACC TTTTTCACTT TGTACATCAA 
ATCAGCAGAG AGCATATATG CATTACTTCA ATGAGAGGAT TTGCTTTGTT 
TTTAAACAAA GGCTATATTT ACACAAAACA AATCATTCTC TTTTTAATGT 
TCTTATAATA TTTTGTTGGT TTTTGAAAGG TAATAATAGA GATCGAAGCC 
AAGAATGTCA CTAGAGTCTA TAGACTTGCT TTTAATAACA GGTGGGGAGG 
TTGAAGGTTT TGGTAGGTAG GTATCTTGCA AGACATACAT ATAACATATT 
GATGAGTACT TACTTGCTCA ATATTACTTC AAGCTGAAGC AAAATAACAT 
ATGAAACCAA ATTGAGATAA CACTTCAAAT CATATTGCAA ATGTAAAGAG 
TGAATTTGCA CAATGATTTA CAAAGTGAAC ATATACAACA ATGGATTATA 
AGTTCTTAAA AAAACACAAA AAAAAAAAAA ANNNTTTTTT TNAAAGAACC 
TTGGGGGNAA NTTTTGGGTT TTTTGGGTTT TNNAAAACNC CNCCCCNTTT 
TTCCCNTTTT TTCCAACCNA NCCNNANTTT TTCCCNNNNN AAANNGGNCC 
CCTTTTTNGN CCACCGGGNA GNAAAAACCC CCCCCCCNTT TNNNNNNAAA 
AACCNTTTTN TTTTNNANAA AAAAAAAAAA AAAAAT

3 prime edge [+] show sequence

Chromosome: 5; Position: 422761 [Map]; Strand: c
- AT5G02130.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: -729; Region: promoter
- AT5G02140.1 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: -623; Region: promoter

ATAACATATA ACATAATTTT TGAAAGAAAA ACAAACTGAC ATATAAAATC 
AAAAGTTCAA AACTCTAGTG AAGCACTCTA ACATTTTCCT TATTACAATT 
TTCATATAGA CTCAAAACAG TGAATTCAGG TGGTAACATT ACGACATTAT 
TACAAAAATT ATAAAACTAT ATTCAAAAAT ATCAAATCAA TTTCTAAGAA 
TAATTAAAAT GTTAGACAAT GAGATTTTAG CTAGGTCTGA AAATTAGTTA 
TGGATTGTAA AGTATAAACA AATTTGCCTT AAAGAAATGC AATGATGAAG 
AAATCTATGA GTGTTAATCT TTATCCAATA ATAAACGTTT GAGAGACATA 
TGAATCTTTC TCTTTTTCTT TAAATCCAAC TTTAACCCAT TCTTCATAGA 
AGAAGGCTCA CGATCAAGCC TCCATATCTT TCTCTTTCCC ACTAATCCCA 
TGAAAGTCTC AGTTTATAAA ACGTTAGCAC TTGGCAGTTC CCTATACAAC 
AATCCACTTC ACCACACCAA TATTAGTCTT GCAACCCAAG TTTCCACTTC 
TTCCTTCGAC CACGACGTCC TCAACATATT CTTTATTAAT ATTCTCTTGA 
AAACAACCAC AACACACACN AAAGCNAACT TTAGAAGTGA TATATCCCCA 
CACAACACCA CNACNTCNAC ACCANTGACN AAATCTGCAA CTCTATTCCT 
TCTCTTCTCA CTATCTNANC CTTCACTGGN ACGATATC

AT5G02130.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Curator Summary: mutant has Growth rate reduction, increased salt sensitivity; Putative Kinesin Light Chain
Computational Description: NDP1; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990); Has 225 Blast hits to 173 proteins in 57 species: Archae - 4; Bacteria - 100; Metazoa - 49; Fungi - 9; Plants - 38; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G02140.1

Model type: Protein coding
Short Description: Pathogenesis-related thaumatin superfamily protein
Computational Description: Pathogenesis-related thaumatin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G18250.2); Has 1588 Blast hits to 1558 proteins in 178 species: Archae - 0; Bacteria - 37; Metazoa - 56; Fungi - 96; Plants - 1388; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink).
Link: InterPro Scan - TAIR