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Mutant Lines
53-4321-1

53-4321-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 19608474 [Map]; Strand: c
- AT2G47890.1 - [+] show detail - B-box type zinc finger protein with CCT domain
  Distance: 0; Region: exon1 (CDS)
- AT2G47890.2 - [+] show detail - B-box type zinc finger protein with CCT domain
  Distance: 0; Region: exon1 (CDS)

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTGCCAGAA CCAGCAAAGA ACAGACCTTT CAGTCTCGCA 
GAAAAGGGAA GAGGGAGATT CGTTGCAGGA GTCGCAGAGA AGTGACCTGA 
AGTGTTTGGC GAAGAGTTGG TTGGCGACGT GGACTTGCTT GTCGCAGGCG 
AGGCAGAGCT TGGCGGAGTC AGCTTTGCAG TAGACAAGAG CCACGGAGGA 
GTCGCAATAG TCGCAGAGGC GGTCACGCTG ATGACCTTCT TCTGCTTCCA 
TGGGAGGAGC TTAGAGGAGA CGACGCCGAC AGTTTTGGTA AGAAGAAGAA 
GTTGATCTTT TCTTGGGATA TTTTGGGGCA ACAAAACCAA ATTTGGTGGC 
TTATGTAAAA GCCATATCTT AATTGCATTC TAGGTAATGA ATGACGTTAA 
AGTGACGACA TATTTGCTTA GACAAAGTCA AATACATTTT ATTTCTTGGG 
GAAGAAGCTG GAAACCTACA CTCTCTTCAC CTTCCCGTGC CTTTCTTTAC 
TCATCTCTCT CACTTAACTC GTGAAAAATA GCTCTCCATT TTTATATATT 
GATTTTTCTT GACATGATAT ATATCGGATT AGCCTAGAAT TTAACATAAT 
ATTTTGGCTA CCACATATAT AATATACAGT ACTTGGTTAG ATTTTTAAAA 
AGTAAATAAG ATCATAACTA ATGAAGGGCT CAAGAGAAAG AGTTAATTGA 
AGTTGACCAC G

3 prime edge [+] show sequence

Chromosome: 2; Position: 19608523 [Map]; Strand: c
- AT2G47890.1 - [+] show detail - B-box type zinc finger protein with CCT domain
  Distance: 0; Region: exon1 (CDS)
- AT2G47890.2 - [+] show detail - B-box type zinc finger protein with CCT domain
  Distance: 0; Region: exon1 (CDS)

GCCAGAACTG CGACTGGCAA CACCACACTG CCTCTTCCTC CCTTCATAGC 
CGCAGACCCT TTGAAGGATT TACCGGCTGT CCCTCCGTGC CTGAGTTGCT 
GGCCATCGTT GGCCTCGATG ACCTCACTCT CGATTCCGGA TTGCTTTGGG 
AGTCACCTGA GATCGTTAGC CTCAACGACC TTATTGTTTC GGGCGGGTCC 
GGTACTCATA ACTTCCGGGC CACGGATGTT CCTCCTCTGC CTAAGGTATA 
ACTTGCTCTG TTTTTTTCTA GCCAATTGCT CTGTTTTATT TTCTTTCTCT 
GAAATGTTTT GAAATGCTCC AGAATCGTCA CGCCACCTGC GGGAAATACA 
AAGATGAGAT GATCCGACAG CTCCGTGGAC TATCCAGATC TGAGCCTGGT 
TGTCTGAAAT TTGAAACCCC AGATGCTGAG ATCGATGCCG GGTTCCAATT 
CCTAGCGCCG GATTTGTTTT CTACATGCGA GCTGGTAATA GACACTGCTA 
TTGGTTGTGT TTTCTTGTGC TTGTCAAATG ATTTTCCAGC TTATAAATCT 
CTCTTGTCAA TATGAAGGAG AGTGGACTGA AATGGTTCGA TCAGCAAGAT 
CATGAGGACT TTCCATATTG CTCTCTGCTA AAGAACTTGT CGGAGTCAGA 
TGAGAAACCT GAGAATGTAG ACCGAGAGTC ATCGGTGATG GTTCCCGTTT 
CCGGCTG

AT2G47890.1

Model type: Protein coding
Short Description: B-box type zinc finger protein with CCT domain
Computational Description: B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: stem, inflorescence meristem, root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G28050.1); Has 3246 Blast hits to 2264 proteins in 130 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3153; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G47890.2

Model type: Protein coding
Short Description: B-box type zinc finger protein with CCT domain
Computational Description: B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: stem, inflorescence meristem, root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G28050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR