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53-4329-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24280093 [Map]; Strand: c
      • AT5G60360.1 - [+] show detail - aleurain-like protease
        Distance: 0; Region: exon1 (CDS)
      • AT5G60360.2 - [+] show detail - aleurain-like protease
        Distance: 0; Region: exon1 (CDS)
      • AT5G60360.3 - [+] show detail - aleurain-like protease
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-4329-1 - 3-prime edge 
    GCCATGTCTG CGAAAACAAT CCTATCATCA GTAGTTTTGG TGGTTCTCGT 
    CGCCGCATCA GCAGCGGCTA ATATCGGATT CGATGAGTCA AACCCGATCC 
    GAATGGTCTC CGATGGTCTC CGGGAGGTAG AAGAATCTGT TTCCCAGATC 
    TTAGGTCAAT CTCGTCACGT TCTCTCTTTC GCTCGCTTCA CTCACCGGTA 
    AGTCTCGTCC TTTCACCACC CGTGCTTTCT CCGTTGACTT TTGATCTTAG 
    CTTTTGATCA TCGTTTGTTG GTGATGAAGA TATGGTAAAA AGTATCAGAA 
    CGTGGAGGAG ATGAAGCT

AT5G60360.1

Model type
Protein coding
Short Description
aleurain-like protease
Curator Summary
Encodes a senescence-associated thiol protease.
Computational Description
aleurain-like protease (ALP); FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: response to ethylene stimulus, proteolysis, aging; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G45310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60360.2

Model type
Protein coding
Short Description
aleurain-like protease
Curator Summary
Encodes a senescence-associated thiol protease.
Computational Description
aleurain-like protease (ALP); FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: response to ethylene stimulus, proteolysis, aging; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G45310.2); Has 8274 Blast hits to 8196 proteins in 788 species: Archae - 71; Bacteria - 343; Metazoa - 3342; Fungi - 8; Plants - 1876; Viruses - 142; Other Eukaryotes - 2492 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60360.3

Model type
Protein coding
Short Description
aleurain-like protease
Curator Summary
Encodes a senescence-associated thiol protease.
Computational Description
aleurain-like protease (ALP); CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G45310.1); Has 8252 Blast hits to 8181 proteins in 792 species: Archae - 69; Bacteria - 357; Metazoa - 3329; Fungi - 10; Plants - 1862; Viruses - 142; Other Eukaryotes - 2483 (source: NCBI BLink).
Link
InterPro Scan - TAIR