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53-4331-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24443863 [Map]; Strand: c
      • AT5G60770.1 - [+] show detail - nitrate transporter 2.4
        Distance: -533; Region: promoter
    Flanking Genome Sequence: 53-4331-1 - 5-prime edge 
    NGTNNNNTAC AGCAAATCCT CATAGAGTTT ACNATCAATG TAATAAAGAT 
    CGGCGGTATA ATGACGAAAC TTTATATGNC GCNNCAGCAT GATGTAATCN 
    CTTTNCTATA TGATNCCTTT TCTTTNTAAG TTTNTTTGNN TGAGANAAAA 
    ACNAAATAAC NTAGTCTTNC AGTGGCCAGA ACNNAANANG AGGGTTTACT 
    NNTGNAACTN AGGNTTCGGA NACNATAGGN GGAAGGAGTN AGNGTTGATG 
    GCCTGANAAC NANANNCGNA GAAANTGNAA CGGAGCNTTC CNNNNTNAAA 
    GGTAGGAGAT AGAATCTCNN ANAGNTNGGG GNACGTANNN ANATCCANNG 
    ANACCTNAAN NNTCCGGNTN TTTGCCACCN NTTNCTGCCC ATGNNGGGGG 
    GGACTTNNNA ACNNNGAANG ANGNTGGCTN AGATNGTGAA TNGAGGCANT 
    ATCANCTGGN NAGTGGAGAG AANCNTTCNC TANCAAANNN GGGCCNAANA 
    NCACGCCNNC CCCTNTNGGA ATAAATCCNC NAATTTTTNT TAGGGGATTT 
    TCCTNGAAGT TGGNAAGCTT CCANNCCGGG CNGAAGNCNN CNNNNNCCNT 
    TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24443979 [Map]; Strand: c
      • AT5G60770.1 - [+] show detail - nitrate transporter 2.4
        Distance: -417; Region: promoter
    Flanking Genome Sequence: 53-4331-1 - 3-prime edge 
    ATTAGACATG AAAAGAAATC GTTGTAAACA GAACCAGAAA GTAGTTTCTC 
    GTTTGAGAAA AAAAAAAAAA AAAAAAAAAA ACNNNNNNTN NTTTTGGGNN 
    NGGNTNAAAN TTTTTTTTNG GGGNAAAANN CCNNNNGGGN NNNNNNGGNN 
    NNNGNNCCCT TNGGGGNNTT NNNCCNNNNN NANTTTTTNN NNTTNNNNCC 
    CCCNGGGNNA NNGNANNTTN NCCNNNTTTT NNNNNAAANC CCCCCCCCTN 
    TTTTTT

AT5G60770.1

Model type
Protein coding
Short Description
nitrate transporter 2.4
Curator Summary
member of High affinity nitrate transporter family
Computational Description
nitrate transporter 2.4 (NRT2.4); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: transmembrane transport; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2:1 (TAIR:AT1G08090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR