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53-4346-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1853160 [Map]; Strand: w
      • AT3G06130.2 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: 0; Region: exon5 (3UTR)
      • AT3G06130.1 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 53-4346-1 - 5-prime edge 
    CATGAGAGTA TTGATCATTC CCATAAGGTG GAGGATATGG ATACGGGTAC 
    GGATACGGAT ACGGATGCGG ATTCGGATAT TGGTGCGGGT TTGGCAGGCA 
    TATAGTTAAC TGCCGGTGGT GGCCTTGCGT ACATCATTGG TTGGAACCGT 
    TCGTTCCCCA TAGCTCGTTG CTGGTTCATA ACCGCCGCTA AATATTGCTG 
    TTGTTGTTGC TGTTGCTGCA TTTGCATAGG ATCTATCCCG GCCCCTTGGA 
    AATAACCCTG TGGTGCACCG CCTGGACCGG TCGCTGGTAA CCANTGAACC 
    GCCGGCATAT TCCCCATCGG ACCACCCATA CCCATTTGAC CACCCATTGG 
    CATGCTCATA TTCTGTGGTC CTCCACCTCC CATGGGTCGG AAACCTCCCG 
    AAACTCCTCC AGCCATGGGC CCACCTCCGC CGTTACCCTT TTTTCCGGCG 
    TTGGGACCAC CGCCTCCACC GCCGTTTTTA CCATCTTGTG GATGTCCACC 
    ACCGCCGTTC TTGCCTCCAC CTTGGTTTTG ATTCCCAGGA CCACCCTTAG 
    CACCGCCGCC AGCACCCTTT CCACCACCGG CACCGCCGCC GCCAGCAGCG 
    GGAGCGCCTT TACCGCCGTT TTTAGCAGGA CCACCGGCAA GATTGGCATT 
    CTTCTGAGCG TTCATCATCA TCTGTTGAGC

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1853096 [Map]; Strand: w
      • AT3G06130.2 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: 0; Region: exon5 (3UTR)
      • AT3G06130.1 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 53-4346-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCGT 
    GACTCTCATG CCTTTAGCGA CGAGAACACA TCAAGCTGCG ATATTATGTG 
    AGATGGTTAA AAATCAAAAT AAAACTTTTA TAGTTTGTGT GTATTTGAAT 
    CCTAAGTTGG GGTTTTTTTC GATGGATCGA AATGCTAAGT TGTTGTAGGT 
    TTTTTTTTTN NCNTTNGNAA NACCTCNGGN ATTTAANTAA ANNAATNNAA 
    ANTTNAAAAN AAGNGNAGAA NTTTTTTTTT TTTTNCNNNN NANNNGNNNA 
    AATTTTTTTN CCNANTTTNC CNNAAAANNA NTTTNAAANT NCNNGGGNGN 
    GNTAAAAAAA NNCCGGGGNT NCCCCCCCCN ANNNGANTTA NAATTTNGCC 
    CCNTTNGGNT NNCNNTTTTT ACCCCTTTTT NTAANNGGNN CCNGGGNTTT 
    TNNGGGNNGG GGNGGGGGGG CCNCCNNNCC CTTTTTTTNN AAAANANTTN 
    CCCCNTTNTT NNGNAAAGNC CCTNNNNCTT NNNGGGGGGG NNGCANAANN 
    TCCNAAAANC NTTTTTTTNN NNNGNCNCCC CCNCNTNTTT NNNCNNNCCN 
    NNNNNTNNNN NGGGNGGGGG NCCNNNTTTT NCNNNNNNNN NANNNNNNNN 
    NCCCCNCCCC CCNNNANNTN TTNNNNCNNN AAAAAAAANN NNTNNGNNNT 
    TTNAAAAAAA AAAAAAANNN NNGNGGGGGN NNCNNCCCCC CCNNCNNNNT 
    TNNNNANNTN NNCCCCNNNC CCCCCCC

AT3G06130.1

Model type
Protein coding
Short Description
Heavy metal transport/detoxification superfamily protein
Computational Description
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G19090.1); Has 122077 Blast hits to 41053 proteins in 2213 species: Archae - 188; Bacteria - 33817; Metazoa - 49902; Fungi - 6812; Plants - 10774; Viruses - 1540; Other Eukaryotes - 19044 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G06130.2

Model type
Protein coding
Short Description
Heavy metal transport/detoxification superfamily protein
Computational Description
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G19090.3).
Link
InterPro Scan - TAIR