1. Home
  2. Mutant Lines
  3. 53-4418-1

53-4418-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 306972 [Map]; Strand: c
      • AT2G01680.1 - [+] show detail - Ankyrin repeat family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 53-4418-1 - 5-prime edge 
    AGCAGAGCCA CATCAAAATA TCTTCAAACT ACGAAATTCA AATCCATTTT 
    CAGCAATTTC AGATTCAAAA TCATAATCAG AGAGCCAAAG TTTGAAGATT 
    TGAAGTCAGA ATTAGTGAGA CATACCCAAG TGACCTCGCT TGGCAGCGAC 
    ATGAAAAGCG TTCATGTCGG ATTTGGATCT GATCTTAACT GTTTCCAAAC 
    TAGAAAACCT AATCAAGTAA CGAAAAATGT CTTCAAGATT CTCTGCGGCG 
    GAGATATAGA CGGCGGTCTC TCCGGCGTCG TTTTGCACAG ACATAAGCTC 
    AGCCACAGCA GAACACGGCG ATGACTCATC GATTAGCTCA TCTCCGGTTA 
    AATTGTCAAC TAACTGTTGA AGTTGACTAA GATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 307089 [Map]; Strand: c
      • AT2G01680.1 - [+] show detail - Ankyrin repeat family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-4418-1 - 3-prime edge 
    GACTGCTTAT GATCTCCAGG AATTGTGAAG GAGTTACTGA GACTATGGCC 
    AGAGCTTTGC AGAATCTGCG ACGCTTCCAA CACGAGTCCG CTTTACGCAG 
    CTGCGGTTCA AGATCACTTA GAAATAGTAA ATGCAATGCN TTGATGTTGA 
    TCCTAGCTGT GCAATGATTG TGAGAAAGAA CGGGAAAACA TCTTTGCACA 
    CTGCGGGAAG GTACGGGCTT CTTCGGATAG TGAAAGCTCT CATAGAGAAA 
    GACGCAGCGA TTGTTGGTGT TAAAGATAAG AAAGGTCAGA CTGCTCTTCA 
    CATGGCTGTT AAAGGACGAA GTTTGGAAGT AGTCGAAGAG ATTTTGCAGG 
    CTGATTACAC AATATTGAAT GAGAGAGATC GAAAAGGGAA CACTGCTTTG 
    CATATTGCTA CTCGAAAGGC GCGGCCACAG GTATTACTCC ACTCCTTTCT 
    TAGCTTCTTG TATTGCTAGT TAGCTTTCAA GAACAGGGGT TGACACATAA 
    ATGCCTTTTG TGTTTTGTTT ATTAGATAAC GAGCTTATTG CTGACCTTTA 
    CGGCGATTGA AGTGATGCGA TTACAACCAG AAGAAACTGC TATGGATTTG 
    GCGGATAAGC TGCAATATAG CNAATCTGCT TTGGAGATCA ATGAGGCTTT 
    GGTNAAACTG GGGCTANNCT TGGGAGGGTC TTTGNNCNAN AAAANTNNGG 
    CANAGCNTTN TTTCNACC

AT2G01680.1

Model type
Protein coding
Short Description
Ankyrin repeat family protein
Computational Description
Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT2G31820.1); Has 36872 Blast hits to 17947 proteins in 711 species: Archae - 48; Bacteria - 2509; Metazoa - 18623; Fungi - 3211; Plants - 2983; Viruses - 164; Other Eukaryotes - 9334 (source: NCBI BLink).
Link
InterPro Scan - TAIR