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53-4424-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30117008 [Map]; Strand: w
      • AT1G80060.1 - [+] show detail - Ubiquitin-like superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-4424-1 - 5-prime edge 
    TTCTATTACA GGNCCGGTAC GGGATTTTCC CATCCTACTT TCATCCCTTT 
    NNATNATGCC GTGACCTNCC AGAGGAGAAA TGGNGANTAC TTGTTCCACA 
    GCTNTTTTGA GCTCTGCCAC TGAGCAATCC TTTGCAACTT CCACATCTAT 
    TGATTCGTTG GAAACCATTT AACCTTCTTG AGAGGCCAAA TCNCGANACA 
    GTAACCAAAA AACTAGTNGA TACGTTCATC CAAAATTATG TNTATTNAGG 
    CTCTTAAACG ATGATTTCTA ACAGCAACAA AANATTCCGG ATNANAGATC 
    GATTAGGGTN TCACCANCTG AGGGAACCGT TGANCTAGAT TGTAATCTAA 
    ACTCTTAAAA TNGCTATTTC GGAAACTGGA TAAGCAAAAT CNTACCGAAA 
    ANGGAGCCGT TNANCTTAAC GACNGAANGC TACNNNCCCG NNCNGNCTAC 
    CANNCTNNCN CAATAGACAN AANNCCAACT CANATNACCA CACATAANNG 
    ATACNTNANN NTTNTNAGCG NNATNCNCNG GNAATNTCNA NTGNGNNNCT 
    NTNNANCACC CGNGNAGCCT GTNGGGGGGA GGGGGTATTN ANAGACNCNT 
    NNCNATNGGN TGAGGNTCTN NCNANNNNNC NAGNGGGGNN NNCGGTCGNN 
    AANANCTNAC CTNNNGNNTA GNNANNNNTA TNTTNGNNAA NTNNNNGNAN 
    TTTCNNTANN NTAANCCGNC ANNANANNGC NATNGTGGGG NGGGNANNTT 
    TNNGCCNNCC NGNNGCN

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18591542 [Map]; Strand: w
      • AT2G45080.1 - [+] show detail - cyclin p3;1
        Distance: -123; Region: promoter
    Flanking Genome Sequence: 53-4424-1 - 3-prime edge 
    GAGAAGAGTA GCTTTCCAAT GTAGGGCAAC TTCCTCACCT CTTCTTTATT 
    TGAAAATGTT TTTGTTTAAT GTTTATAAGT TACTACTAAC TATAGTGTGT 
    GTGTGTGTGT ACTGAATATT TAATAGTATT CAAACATAGC TCGTGCAAAC 
    TACGAAAGTT CAGGTTTTAT TTTGAAACGT AACTGTATCT CAGATTTGAA 
    TCTCTTTCGT CTAGATAAAG CAATTTAATT TTCACCTACT ATTAGAAATA 
    AACGTTTTTA GAAAGTCTGT TCTTAAAAGC T

AT1G80060.1

Model type
Protein coding
Short Description
Ubiquitin-like superfamily protein
Computational Description
Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G32270.1); Has 129 Blast hits to 129 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G45080.1

Model type
Protein coding
Short Description
cyclin p3;1
Computational Description
cyclin p3;1 (cycp3;1); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin-related 2 (InterPro:IPR013922), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin p3;2 (TAIR:AT3G60550.1); Has 1274 Blast hits to 1274 proteins in 212 species: Archae - 0; Bacteria - 18; Metazoa - 174; Fungi - 605; Plants - 231; Viruses - 0; Other Eukaryotes - 246 (source: NCBI BLink).
Link
InterPro Scan - TAIR