1. Home
  2. Mutant Lines
  3. 53-4471-1

53-4471-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 2343757 [Map]; Strand: c
      • AT2G06020.1 - [+] show detail - Homeodomain-like superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 53-4471-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTT ATTGTTAAAT TTGACATAAA TTAAAACGAC 
    AAAATAACGA TCGGGCATAA CGAAAAATCC AAAATAAACA TATTTGAACG 
    CATAAAAAGT TATTCGCCGC AAAGAAAATG TTGGATAAAT CATAAACATT 
    CCAAGTTTGT TGCTAAAAAA CAGAAATGAA AATCATGATT AACGACTTAA 
    ATATCTTAAA TTTCATCAAC ACAAATTTAA AGTTTAGGTC AACAAAATAG 
    TGTTAAAAGT TTCACTTTTC AAAATAATAA ACATATAAAA AATGAACATA 
    TGTAAAATAT TTGATATCAG TTAAACTTCT AAAGAAATTT TAATCATGCC 
    TTATTCTGGT AATAACCAAA AAGTGTTAAA ATAATTATGA AAATGATCTA 
    TATTGAAAAA TGATCCAAGT TAAATACAAC TAAATATAAA TAAGATCAAG 
    CATATATATC ATTTGTTTAT GATTGTTATG CAAGAAAAAA AACAGAAATA 
    TTATTTGTTT ATGACTGTCT GCAAGAACAC AAATCACATA TATATTTTTA 
    AATTATGTAA AGCGAATCAA ATATAATCTA AAACACACAA AATAGTTGTA 
    GCGTTGATCT TCTTTTTCCT CCTAAGAATA TATCATAAGA TCAATGAATG 
    ATAAAACTGA TTTTTTTGAA TATAAACTTT TATATCCATG TAACTGATCA 
    CAAATCTATA AAGATTAATT TCAAAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 13701318 [Map]; Strand: w
      • AT1G36380.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant stru...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 53-4471-1 - 3-prime edge 
    TTNATGACCT NNGAGCTNGC GATTTCTGAT AAAAANTGAG TCCATAAGAC 
    CAAGTAAATA AGATGAATAT GGCTCAATTG GGGAACATGA TTCAAAGAGT 
    AATTACCATT GGGGAACAGG ATTCTGAGAA CTGATACTTT TGTAGAATTT 
    GGCGATTCNA CCACCGAGAT TCAGGTTTTG GTATAAAGGT TTTCTTCCTC 
    AAGCCAAAGA TC

AT1G36380.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 14 Blast hits to 14 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G06020.1

Model type
Protein coding
Short Description
Homeodomain-like superfamily protein
Computational Description
Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G13640.2); Has 1600 Blast hits to 1597 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1585; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Link
InterPro Scan - TAIR