Home
Mutant Lines
53-4532-1

53-4532-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 227365 [Map]; Strand: w
- AT4G00500.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
  Distance: 0; Region: exon1 (5UTR)
- AT4G00500.2 - [+] show detail - alpha/beta-Hydrolases superfamily protein
  Distance: -170; Region: promoter
- AT4G00520.2 - [+] show detail - Acyl-CoA thioesterase family protein
  Distance: -329; Region: promoter
- AT4G00520.3 - [+] show detail - Acyl-CoA thioesterase family protein
  Distance: -329; Region: promoter

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCA TGCTCGAAAG ATTCCATTAG CATCCTCGAG 
ACTAGCGGAG AAAGACGTGC AATGTAGAAA TTTCGTCTTC GGAAGCTGTC 
GGGTCGGGTC GGGTCGGGTC GGATCTGTGC TGAGTGTAGA AGAAACTTTT 
GTTTTCTATA GGACAGCGTA TTAGGATTTA GGACCAACAA ATTTGGGCTT 
TTAGCTATAG GCCCATTAAA TTTGTCAGCA CTGCATCTGA GCGGTGTCCA 
CAGACTCTAT CGTATACCCA AGGGTACCTG GATAATTACC TCGTTGCATT 
TTTTATTTGT TTGGTCAGCA GATTTTTAGT TGAATGATTG AATTTGCCGG 
CCAACGTTTC GACAGTCTCT ACACCGTCAT GAACACTGAA TCAGGTAATT 
CCGATATCTT TTTTCTTTGT TCTATCGCCG GAGAAATGAA AGAGATGTTG 
AACTGAGAGT TTTTCCAAGA TTCGGATGAT TTTTCATATG ATTGGTTGCT 
TTGGTTTTGT AGTTGTGGAG TTCCTTGGGA ATGTGACCTT GTTGCAGCGA 
TTACCTAGTT CTTCTTTGAA GAGAATAGCT GAAGTTGTTC TCTTCAAACG 
TTATGGTCAG TGATTCTGGG ATTTTGCTTT TGTTCTTATC TTGAAGTCAG 
TTTGATTGGG AATTTCNGTT ATGTTTTGGT GATCTGNATT CAGTGTCAGN 
GCGTGTTCTT GAGTNTAACA CTTGANCAGN GATT

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 227348 [Map]; Strand: w
  - AT4G00500.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
    Distance: 0; Region: intron1 (5UTR)
  - AT4G00500.2 - [+] show detail - alpha/beta-Hydrolases superfamily protein
    Distance: -153; Region: promoter
  - AT4G00520.2 - [+] show detail - Acyl-CoA thioesterase family protein
    Distance: -346; Region: promoter
  - AT4G00520.3 - [+] show detail - Acyl-CoA thioesterase family protein
    Distance: -346; Region: promoter
Flanking Genome Sequence: 53-4532-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTTG 
GTGAGTAGAT TCTTCTTGCC CACAAGTTTC TTTCATTGTT TCGTCTTTAC 
GAACTATGGT TGACTTGAAC ATTTCGTAGA TAACAAATTC AACTTGTCTT 
CTCTCTCTGT AATTCGTGTC TTCTTCAGCA GCCAAAAGAA ATCACNTTGA 
TTGTTAAAAA TTCTTCTTTT TTTATTTTAG AGTAGTTGGT GGTGGTTTCG 
GACACAAATC TTGGAACACA AGCT
```

AT4G00500.1

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Computational Description: alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity, calmodulin binding; INVOLVED IN: lipid catabolic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), Mono-/di-acylglycerol lipase, N-terminal (InterPro:IPR005592); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G49050.1); Has 561 Blast hits to 561 proteins in 134 species: Archae - 0; Bacteria - 2; Metazoa - 171; Fungi - 76; Plants - 213; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00500.2

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Computational Description: alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity, calmodulin binding; INVOLVED IN: lipid catabolic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), Mono-/di-acylglycerol lipase, N-terminal (InterPro:IPR005592); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G49050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00520.2

Model type: Protein coding
Short Description: Acyl-CoA thioesterase family protein
Computational Description: Acyl-CoA thioesterase family protein; FUNCTIONS IN: acyl-CoA thioesterase activity; INVOLVED IN: acyl-CoA metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), Acyl-CoA thioesterase (InterPro:IPR003703), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Acyl-CoA thioesterase family protein (TAIR:AT1G01710.1); Has 3429 Blast hits to 3402 proteins in 976 species: Archae - 0; Bacteria - 1910; Metazoa - 393; Fungi - 300; Plants - 65; Viruses - 0; Other Eukaryotes - 761 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00520.3

Model type: Protein coding
Short Description: Acyl-CoA thioesterase family protein
Computational Description: Acyl-CoA thioesterase family protein; FUNCTIONS IN: acyl-CoA thioesterase activity; INVOLVED IN: acyl-CoA metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), Acyl-CoA thioesterase (InterPro:IPR003703), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Acyl-CoA thioesterase family protein (TAIR:AT1G01710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR