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53-4552-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 91999 [Map]; Strand: c
      • AT1G01220.1 - [+] show detail - L-fucokinase/GDP-L-fucose pyrophosphorylase
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-4552-1 - 5-prime edge 
    CTCGGGACCA ANATCAAAAC CCAATTTCTC ATAATGACGA GCGAGAGCAT 
    AAATGGCTGT TGAGAGTAGC AGCACCAGAC CCGATCCGTT TGCCATCTGG 
    ATCAGGAACG GCCAAAGTGA CAGTGGAGCT AGCTATTCGT CCCATACGTT 
    TCGCTCGCCG GAGCTGCCAG TCGTAGAGCT CCGCTTGTTC AGGACTAGCC 
    GCTGTGAGCA CAATCGCATC CCAAGTCGGG ACCCGAGTGG GATGGCGCAC 
    CGAGAGCCTT AAGTGGTACC ATGACTTGCG CAAAACNGTG GCTAAGTCAG 
    CTTTCTTCCT CTGCTTAGAC ATCTTCTTGC TACAAAGACG AAGAAATGTG 
    AGAAATTAAA ATCTGGAGCC TAAAGGTTAG GTGAACAGAG GAAGAGGGAG 
    AAGAAGAAGT AAGTTTTGTT CAGATCAAAG TCAAATACCA ATGCAATTAA 
    TAAATACGTC GTCGTCTCAA TACTGAATCT TAAACCAGAT CAATTTGCTT 
    CACCTCAAAG ATTAAAACTT TGCACAACAT TCCAAAATTA TATCGAATAC 
    AGAAACTCTT GAGCAGACAG AAAGAAGCAG AGTACATAAA GGATCTGCTA 
    AATTTGCAAT GGTAAAACAA ACTCTAAGAA GATTGCAAAA GAAGAAACTT 
    TCAAAATTGG CAGAGGCAAG AGACAGAGGA GATGATNCAT CATTCAGTTC 
    ATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 92115 [Map]; Strand: c
      • AT1G01220.1 - [+] show detail - L-fucokinase/GDP-L-fucose pyrophosphorylase
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 53-4552-1 - 3-prime edge 
    GTCCCGAGGT AAACATTGTG TTGACAGGTT AGACTATTCA TAATTTGACC 
    TCACTGTATC TCTTGCTTGA GTTGATATCT GAATCATTAC GGTAGTTGGT 
    TTTGTTGTTT AACTTTGTTA ATTTGATGAA TCTGGGATGT GCAATAAACT 
    ACATCTGTTT ATATAGCAGT GTGGTGTGAT TTGATGTTGT ATGTTAATAA 
    TCAACAGATG GAAGTTGCGA ATGGTGCTTG CAAATGGGTT AGATTCATCT 
    CTGCAAAGCA TGTATTGATG CTTCATGCTG GAGGTGACTC CAAAAGGGTT 
    CCATGGGCAA ATCCTATGGG CAAAGTATTC CTCCCACTTC CTTATCTTGC 
    AGCTGATGAC CCTGATGGTC CTGTTCCTCT CCTTTTTGAT CATATTCTTG 
    CTATCGCTTC ATGTGCAAGA CAAGCT

AT1G01220.1

Model type
Protein coding
Short Description
L-fucokinase/GDP-L-fucose pyrophosphorylase
Curator Summary
Encodes a bifunctional enzyme that has both L-fucokinase and GDP-L-fucose pyrophosphorylase activities. It catalyzes the two steps of the L-fucose salvage pathway for the generation of activated GDP-L-fucose. This pathway seems to be of minor importance for cell wall polysaccharide biosynthesis compared to the de novo GDP-L-fucose biosynthesis pathway in Arabidopsis.
Computational Description
L-fucokinase/GDP-L-fucose pyrophosphorylase (FKGP); FUNCTIONS IN: fucose-1-phosphate guanylyltransferase activity, fucokinase activity, ATP binding, galactokinase activity; INVOLVED IN: GDP-L-fucose salvage; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), L-fucokinase (InterPro:IPR012887), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); Has 1878 Blast hits to 1819 proteins in 539 species: Archae - 59; Bacteria - 918; Metazoa - 155; Fungi - 3; Plants - 87; Viruses - 3; Other Eukaryotes - 653 (source: NCBI BLink).
Link
InterPro Scan - TAIR