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53-4560-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30186297 [Map]; Strand: w
      • AT1G80280.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-4560-1 - 5-prime edge 
    GTAGGAACCA TAGAGAGAAG AAACGGAAAC GACCAACAAT CCACCAACTT 
    CGGAGGATTT CGCAGACGAA GGTGGTGGCT GAGTTGGCCA TAAGCCGGCG 
    GCAGAGGATG AAGAGGAAAA AAGCGACCCC TTAAACGCAA TGAGAGAGAG 
    AGAGAGACCG GATCAAAAAC AAANNGANAG AGGAAAAGCC ATTGCCACGA 
    TTCTGAATGG AAAGCTTGAA GAGTTTCATG AATCGCTCGA ACGGCGAAAC 
    AATGAGGGAG AGAGANANAA ACAAGAGAAT NTTTNGNACA ATCCGGAAAT 
    TTTCNNGACC CTCCGNNATC TTNCNCNCCT TTTTGAGATT TTTTNTCTAC 
    AATTTTTGTN TGTATNTTNN AAACNNNTNT TTTTNTTTTT AAAACANTAA 
    NCNCGGGGAT GATANNTTTA TNANGNGTTN TGNNGATTAN NNCGTGTGNN 
    GANNAATAAA ANNNGNGGGG NNGCTAANNG ANTNTTTAAN ANACAATTCC 
    NGGNGGGGNC TNTNANTTNC CATNNANCAG AGGGGGTGNG NTGGNNNAAA 
    NTTCCNCCCC CCCTNTTTTT NAAAAAAANA AAGGGNAGNG GGGANNNTNN 
    CTTNNNTGTN TTTNNNTNAA AANANNNNNN NNNGGNTAAA ANNAAGGGGN 
    ANTTTNNTTT NTNTAAAAAN NAAAANTTTT TTNTTTAAAN NTTNAANANA 
    AANAANNNNN NNGGGGGGGN GNGNTNTTTT NNNAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30186185 [Map]; Strand: w
      • AT1G80280.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-4560-1 - 3-prime edge 
    CCTAGTTCCT ACTCCCTCAT AATTTAAGGA TCTGTATCGG AATAACCGAA 
    ACGATCTCCG ATTTTCGGAT TTGAATATTT TGGGGGAAAT TAAAAGAATG 
    GGGAAAGGTT GGATCATGGT AGAGAAAGCT AGAAGATGCT TAAGGACGGT 
    GTTCTTCATG GTTGCGATGC TGGTCTCGCT GTTAGTTTCT TCGTTGCCGG 
    TGCTTGTAGC CATCGGCGAC GTTTTAGTTC CGACCTTTTT GCTTTCGAGC 
    TTTACTTGTT TGACGTGCTA CGGCTTCAAG GAGCATCTGA GTCGATACGC 
    TTTCAAGAGC TCTTTGACTG ATATTCCTCT CGTCTCCCTC GTCAGATCTT 
    TCCTTGTCAT CTGTAAGAAC TAAGAACCAT CCTCCTCCTT CTTTTCTCTC 
    TGAGTTTTGC TTTTTCTCGA TATGATTGTA TTCTTCTGTT CATGAACAGG 
    TGTCTACTCT CTATCCGATG CTCCTGCACT TTCGCATGGC CCTTACCTTG 
    GAACTGTATC GCTGTGTTCT GTTGTTTCTG TTGTTCTTCT ATCAGTAAAA 
    GCT

AT1G80280.1

Model type
Protein coding
Short Description
alpha/beta-Hydrolases superfamily protein
Computational Description
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G15490.1); Has 7676 Blast hits to 7658 proteins in 1204 species: Archae - 71; Bacteria - 5735; Metazoa - 276; Fungi - 71; Plants - 550; Viruses - 0; Other Eukaryotes - 973 (source: NCBI BLink).
Link
InterPro Scan - TAIR