Home
Mutant Lines
54-0070-1

54-0070-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 143975 [Map]; Strand: c
- AT2G01275.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
  Distance: 0; Region: intron1 (5UTR)
- AT2G01275.2 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
  Distance: 0; Region: intron1 (5UTR)

TGTGAATNAG AAGATGCGGA ATTAATGAAG AAAAAGTTTG AAACATTGAT 
GAGATCAAGG CGACTTAAAA TAAGCTAAAG AAGTTTAATT TGTGGATTAA 
TTGAAAGAGC TAATGATAGA TGGTGGTTTA GGTAAAGCTG AACCAAACCT 
GGTTGGTTAC CAGAACACAA AAGCTGTACA AACTAAATAT GTTTCTTATT 
GTTTGACCAA ACTAACTGCT NTTTTTTTTT ATCAAAACGG TTTAGTGGAA 
TTTTGCACCC AAAANNGGGG CCCNAAATCT AAGAATCTGT ATTTACCGTA 
ANAAAAAAAA NNTATGTAAG GGTTTTCATA ATTTGCAATA AATAATAAAT 
TTAAGACGGC AAAACAAATT AGAGAAAGTT TTGAATGAAT GAANAATACN 
CTTGNGACAA AACATANNAC ANCCCGTTTG ATANGGATAT TNNTTAGGCT 
NACNCAAAAT TTNNGAGATG GAGGAGCGGA ANAGCTNTNN NNCCGTTTTC 
TTNTNCTTTT TNNTTTNTNN TTNATNAGGA ANAANAANNN NNNNNGCNNA 
TATNNAGGAG ACTANNTNNA NTTTNTTNTT TATNANTNNN TTTTGATNTN 
AANNCNTGNN NNCCCTNC

AT2G01275.1

Model type: Protein coding
Short Description: RING/FYVE/PHD zinc finger superfamily protein
Computational Description: RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G38070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01275.2

Model type: Protein coding
Short Description: RING/FYVE/PHD zinc finger superfamily protein
Computational Description: RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G38070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR